WormBase Tree Display for Gene: WBGene00013218
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WBGene00013218 | SMap | S_parent | Sequence | Y54G11A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y54G11A.9 | |||||||
Molecular_name | Y54G11A.9 | ||||||||
Y54G11A.9.1 | |||||||||
CE35683 | |||||||||
Y54G11A.9.2 | |||||||||
Other_name | CELE_Y54G11A.9 | Accession_evidence | NDB | BX284602 | |||||
Public_name | Y54G11A.9 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (36) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00102961 | ||||||||
00102962 | |||||||||
00102963 | |||||||||
00102964 | |||||||||
00102965 | |||||||||
00102966 | |||||||||
00120119 | |||||||||
00120120 | |||||||||
Contained_in_operon | CEOP2636 | ||||||||
Ortholog (33) | |||||||||
Paralog | WBGene00045279 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
WBGene00012666 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable 2 iron, 2 sulfur cluster binding activity; 4 iron, 4 sulfur cluster binding activity; and iron ion binding activity. Predicted to be involved in iron-sulfur cluster assembly and protein maturation by [4Fe-4S] cluster transfer. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in multiple mitochondrial dysfunctions syndrome 4. Is an ortholog of human ISCA2 (iron-sulfur cluster assembly 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0080136 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:19857) | ||||
Molecular_info | Corresponding_CDS | Y54G11A.9 | |||||||
Corresponding_CDS_history | Y54G11A.9:wp109 | ||||||||
Corresponding_transcript | Y54G11A.9.1 | ||||||||
Y54G11A.9.2 | |||||||||
Other_sequence (25) | |||||||||
Associated_feature | WBsf990684 | ||||||||
WBsf1013828 | |||||||||
WBsf224264 | |||||||||
WBsf224265 | |||||||||
Experimental_info | RNAi_result | WBRNAi00024222 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00024149 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00023349 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020465 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00057434 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00023862 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037489 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020990 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062452 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020954 | ||||||||
Expr1160870 | |||||||||
Expr2007930 | |||||||||
Expr2026172 | |||||||||
Microarray_results | SMD_Y54G11A.9 | ||||||||
186442_s_at | |||||||||
A_12_P119245 | |||||||||
A_12_P137443 | |||||||||
A_12_P141630 | |||||||||
GPL13394_WBGene00013218 | |||||||||
GPL13914_Y54G11A.9 | |||||||||
GPL14144_Y54G11A.9_287-346_0.924_3_C | |||||||||
GPL14144_Y54G11A.9_341-400_0.926_2_B | |||||||||
GPL14144_Y54G11A.9_51-110_0.940_1_A | |||||||||
GPL19516_CGZ0001330 | |||||||||
GPL19516_CGZ0049151 | |||||||||
GPL21109_B0513.12 | |||||||||
GPL21109_Y54G11A.9 | |||||||||
GPL3518_CE26183 | |||||||||
GPL8304_CE_WBGene00013218_A | |||||||||
GPL8673_Y54G11A_9P00012 | |||||||||
GPL8673_Y54G11A_9P00069 | |||||||||
GPL8673_Y54G11A_9P00255 | |||||||||
Expression_cluster (80) | |||||||||
Interaction (38) | |||||||||
Map_info | Positive | Positive_clone | Y54G11A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 22.9058 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |