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WormBase Tree Display for Gene: WBGene00013181

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Name Class

WBGene00013181SMapS_parentSequenceCHROMOSOME_I
IdentityVersion1
NameSequence_nameY53H1B.2
Molecular_nameY53H1B.2
Y53H1B.2.1
CE24431
Other_nameCELE_Y53H1B.2Accession_evidenceNDBBX284601
Public_nameY53H1B.2
DB_infoDatabaseAceViewgene1L884
WormQTLgeneWBGene00013181
WormFluxgeneWBGene00013181
NDBlocus_tagCELE_Y53H1B.2
PanthergeneCAEEL|WormBase=WBGene00013181|UniProtKB=G5EDV7
familyPTHR39385
NCBIgene173020
RefSeqproteinNM_060498.7
TREEFAMTREEFAM_IDTF315763
TrEMBLUniProtAccG5EDV7
UniProt_GCRPUniProtAccG5EDV7
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (29)
RNASeq_FPKM (74)
Ortholog (31)
ParalogWBGene00012646Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00014049Caenorhabditis elegansFrom_analysisTreeFam
Panther
Structured_descriptionAutomated_descriptionEnriched in several structures, including PLM; anterior hypodermis; body wall musculature; muscle cell; and rectal epithelial cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; proteomic; and RNA-seq studies. Is affected by twenty chemicals including aldicarb; diallyl trisulfide; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Leucine-rich repeat domain superfamily.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY53H1B.2
Corresponding_transcriptY53H1B.2.1
Other_sequence (45)
Associated_featureWBsf649619
WBsf985254
WBsf985255
WBsf985256
WBsf1010696
WBsf1010697
WBsf220326
Experimental_infoRNAi_resultWBRNAi00057329Inferred_automaticallyRNAi_primary
WBRNAi00037449Inferred_automaticallyRNAi_primary
WBRNAi00004717Inferred_automaticallyRNAi_primary
Expr_patternExpr1026604
Expr1035857
Expr1160767
Expr2007882
Expr2026123
Drives_constructWBCnstr00029734
Construct_productWBCnstr00029734
Microarray_results (18)
Expression_clusterWBPaper00030922:glycosylated_protein
WBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00033444:BacteriaDiet_regulated
WBPaper00037849:sam-10(js94)_upregulated
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:bodywall-muscle_larva_enriched
WBPaper00037950:bodywall-muscle_larva_SelectivelyEnriched
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00038061:aldicarb_downregulated
WBPaper00038104:DATS_downregulated
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00040560:hpl-2_embryo_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:flat_dev_expression
WBPaper00044746:aging_upregulated_HeatShock
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045217:prg-1_progressively_regulated
WBPaper00045314:S.aureus-induced_hlh-30(tm1978)
WBPaper00045314:S.aureus-induced_N2
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00045861:set-2(ok952)_upregulated
WBPaper00045861:wdr-5(ok1417)_upregulated
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00046509:htz-1(ok3099)_upregulated
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048988:neuron_expressed
WBPaper00049217:TCER-1_downregulated
WBPaper00049495:starvation-refeeding_regulated
WBPaper00049498:npr-1(ur89)_regulated_1
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049732:blmp-1(tm548)_vs_N2_upregulated
WBPaper00049905:Age_variant_expression
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00049942:HeatShock_upregulated_hsf-1(+)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00049954:BPA_downregulated
WBPaper00050080:rbr-2(tm3141)_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050332:juglone_upregulated
WBPaper00050344:PLM-neuron_enriched
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050903:mir-35-41(nDf50)_20C_upregulated
WBPaper00050903:mir-35-41(nDf50)_25C_upregulated
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051257:Levamisole_upregulated
WBPaper00051265:F4_morc-1(tm6048)_downregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_72h_regulated
WBPaper00053318:mir-71(n4115)_upregulated_mRNA
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053599:female_vs_male_downregulated
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053814:15C_downregulated_OP50
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055897:heat-shock_upregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056034:pals-25(jy9)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056161:male_enriched_siRNA
WBPaper00056167:Cry5B_downregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056617:adr-1_upregulated_embryo_transcript
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057068:ints-4(RNAi)_upregulated
WBPaper00057158:mdt-15(tm2182)_dependent_15C_downregulated
WBPaper00057162:meg-3_meg-4_upregulated_sRNA
WBPaper00057288:Cold_downregulated_protein
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058948:npr-8(ok1439)_downregulated_OP50
WBPaper00058948:PA14_downregulated
WBPaper00059117:B.subtilis_downregulated
WBPaper00059537:ngn-1(ok2200)_upregulated
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059567:olrn-1(ums9)_regulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059739:hira-1(gk835598)_downregulated_L1
WBPaper00059763:neuron_expressed
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060634:fhod-1(tm2363)_upregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060703:nas-38(ok3407)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061040:eat-2(ad1116)_upregulated
WBPaper00061045:Y56A3A.22(cck200)_upregulated
WBPaper00061340:hyp1_hyp2
WBPaper00061340:K_Kprime
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061527:ccg-1_12351-ZC410.5
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061823:mex-3(spr9)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062587:lsl-1(ljm1)_upregulated
WBPaper00062587:lsl-1(tm4769)_upregulated
WBPaper00062590:Aging_upregulated_hypodermis
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064952:Day5_vs_L4_upregulated_25C
WBPaper00064952:Day10_vs_Day1_upregulated_25C
WBPaper00064952:Day10_vs_L4_upregulated_25C
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:N2_N.ausubeli_regulated
WBPaper00065086:N2_N.ferruginous_regulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065373:sek-1(km4)_upregulated_Ref
WBPaper00065392:Lb.rhamnosus_downregulated
WBPaper00065623:29
WBPaper00065841:4_0
WBPaper00065841:4_1
WBPaper00065841:4_2
WBPaper00065945:epidermis-rpoa-2(-)_upregulated_protein
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066085:sin-3(syb2172)_upregulated
cgc4386_cluster_1_2
WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00026629:L4_male_enriched
WBPaper00027342:alpha-Synuclein(A53T)_downregulated
WBPaper00029437:dcr-1_upregulated
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00030985:Erwinia_carotovora_upregulated
WBPaper00031003:0hr_muscle_enriched
WBPaper00031003:24hr_muscle_enriched
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00031060:2-deoxy-D-glucose_upregulated
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00034757:up_by_oxidative_stress
WBPaper00035227:heat_shock_regulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-8_regulated
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_D
WBPaper00037113:CPF_16C_up-regulated
WBPaper00037695:LD_3-day
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00038231:Cry5B_2-fold_upregulated
WBPaper00038304:octr-1_regulated
WBPaper00040210:Chlorpyrifos_16C_regulated
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040823:alg-1(gk214)_upregulated
WBPaper00040876:mir-35_downregulated
WBPaper00040963:TA300_down
WBPaper00040985:AIN-2_asynchronous_muscle
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041207:CE_dauer_up
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_3h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_3h
WBPaper00041960:N2_fasting_upregulated_9hto12h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042178:hlh-29(tm284)_upregulated
WBPaper00042234:xpa-1_upregulated
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048567:dnj-14_upregulated
WBPaper00048989:N2_allantoin_downregulated
WBPaper00050767:Octopamine_induced
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00053550:daf-19(m86)_upregulated_L1
InteractionWBInteraction000544615
WBInteraction000565293
WBInteraction000568332
WBInteraction000575858
Map_infoPositivePositive_cloneY53H1BInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI7.94033
MethodGene