WormBase Tree Display for Gene: WBGene00013181
expand all nodes | collapse all nodes | view schema
| WBGene00013181 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y53H1B.2 | |||||||
| Molecular_name | Y53H1B.2 | ||||||||
| Y53H1B.2.1 | |||||||||
| CE24431 | |||||||||
| Other_name | CELE_Y53H1B.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y53H1B.2 | ||||||||
| DB_info | Database | AceView | gene | 1L884 | |||||
| WormQTL | gene | WBGene00013181 | |||||||
| WormFlux | gene | WBGene00013181 | |||||||
| NDB | locus_tag | CELE_Y53H1B.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013181|UniProtKB=G5EDV7 | |||||||
| family | PTHR39385 | ||||||||
| NCBI | gene | 173020 | |||||||
| RefSeq | protein | NM_060498.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315763 | |||||||
| TrEMBL | UniProtAcc | G5EDV7 | |||||||
| UniProt_GCRP | UniProtAcc | G5EDV7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00012646 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00014049 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including PLM; anterior hypodermis; body wall musculature; muscle cell; and rectal epithelial cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; proteomic; and RNA-seq studies. Is affected by twenty chemicals including aldicarb; diallyl trisulfide; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Leucine-rich repeat domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y53H1B.2 | |||||||
| Corresponding_transcript | Y53H1B.2.1 | ||||||||
| Other_sequence (45) | |||||||||
| Associated_feature | WBsf649619 | ||||||||
| WBsf985254 | |||||||||
| WBsf985255 | |||||||||
| WBsf985256 | |||||||||
| WBsf1010696 | |||||||||
| WBsf1010697 | |||||||||
| WBsf220326 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057329 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037449 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004717 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026604 | ||||||||
| Expr1035857 | |||||||||
| Expr1160767 | |||||||||
| Expr2007882 | |||||||||
| Expr2026123 | |||||||||
| Drives_construct | WBCnstr00029734 | ||||||||
| Construct_product | WBCnstr00029734 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (243) | |||||||||
| Interaction | WBInteraction000544615 | ||||||||
| WBInteraction000565293 | |||||||||
| WBInteraction000568332 | |||||||||
| WBInteraction000575858 | |||||||||
| Map_info | Positive | Positive_clone | Y53H1B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 7.94033 | |||||||
| Method | Gene |
