WormBase Tree Display for Gene: WBGene00013171
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| WBGene00013171 | SMap | S_parent | Sequence | Y53F4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y53F4B.25 | |||||||
| Molecular_name | Y53F4B.25a | ||||||||
| Y53F4B.25a.1 | |||||||||
| CE48632 | |||||||||
| Y53F4B.25b | |||||||||
| CE49101 | |||||||||
| Y53F4B.25b.1 | |||||||||
| Other_name | CELE_Y53F4B.25 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y53F4B.25 | ||||||||
| DB_info | Database | AceView | gene | 2P429 | |||||
| WormQTL | gene | WBGene00013171 | |||||||
| WormFlux | gene | WBGene00013171 | |||||||
| NDB | locus_tag | CELE_Y53F4B.25 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013171|UniProtKB=U4PEB1 | |||||||
| family | PTHR46705 | ||||||||
| NCBI | gene | 175163 | |||||||
| RefSeq | protein | NM_001306624.3 | |||||||
| NM_001306623.2 | |||||||||
| TrEMBL | UniProtAcc | U4PEB1 | |||||||
| U4PB30 | |||||||||
| UniProt_GCRP | UniProtAcc | U4PEB1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (134) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Automated_description | Enriched in ADE sheath cell; germline precursor cell; hypodermis; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by sixteen chemicals including Ethanol; methylmercury hydroxide; and methylmercuric chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: DB module and Domain of unknown function DB. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y53F4B.25a | |||||||
| Y53F4B.25b | |||||||||
| Corresponding_CDS_history | Y53F4B.25:wp239 | ||||||||
| Corresponding_transcript | Y53F4B.25a.1 | ||||||||
| Y53F4B.25b.1 | |||||||||
| Other_sequence | DAC02442_1 | ||||||||
| ASC05310_1 | |||||||||
| JI254898.1 | |||||||||
| CR06062 | |||||||||
| MJ05105 | |||||||||
| DA04527 | |||||||||
| CRC11508_1 | |||||||||
| Associated_feature | WBsf644885 | ||||||||
| WBsf658460 | |||||||||
| WBsf990907 | |||||||||
| WBsf990908 | |||||||||
| WBsf990909 | |||||||||
| WBsf1013950 | |||||||||
| WBsf1013951 | |||||||||
| WBsf222539 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057279 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020941 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020940 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027613 | ||||||||
| Expr1035851 | |||||||||
| Expr1160717 | |||||||||
| Expr2007853 | |||||||||
| Expr2026094 | |||||||||
| Drives_construct | WBCnstr00029739 | ||||||||
| Construct_product | WBCnstr00029739 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (199) | |||||||||
| Map_info | Positive | Positive_clone | Y53F4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 24.1135 | |||||||
| Method | Gene |
