WormBase Tree Display for Gene: WBGene00013130

WBGene00013130 SMap: S_parent: Sequence: Y52B11B
  Identity: Version: 1
    Name: Sequence_name: Y52B11B.1
      Molecular_name: Y52B11B.1
        Y52B11B.1.1
        CE19220
      Other_name: CELE_Y52B11B.1 Accession_evidence: NDB BX284601
      Public_name: Y52B11B.1
    DB_info: Database: AceView gene 1L715
        WormQTL gene WBGene00013130
        WormFlux gene WBGene00013130
        NDB locus_tag CELE_Y52B11B.1
        NCBI gene 173008
        RefSeq protein NM_060463.6
        TrEMBL UniProtAcc Q9XWM7
        UniProt_GCRP UniProtAcc Q9XWM7
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00670706
      WBVar00670707
      WBVar00670708
      WBVar01947992
      WBVar01499739
      WBVar01499788
      WBVar01499054
      WBVar00156842
      WBVar01663041
      WBVar01498959
    RNASeq_FPKM (74)
    Ortholog: WBGene00209182 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00271678 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP39.g13211 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Cni-Y52B11B.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17397 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_17969 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_003490 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_10033200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g2194 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in hypodermis and neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; dpy-10; and rrf-3 based on microarray; RNA-seq; and tiling array studies. Is affected by thirteen chemicals including Ethanol; methylmercury hydroxide; and Tunicamycin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y52B11B.1
    Corresponding_transcript: Y52B11B.1.1
    Other_sequence: CJC12657_1
    Associated_feature: WBsf218511
  Experimental_info: RNAi_result: WBRNAi00004700 Inferred_automatically: RNAi_primary
      WBRNAi00037390 Inferred_automatically: RNAi_primary
      WBRNAi00078367 Inferred_automatically: RNAi_primary
      WBRNAi00001374 Inferred_automatically: RNAi_primary
      WBRNAi00057227 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012497
      Expr1160664
      Expr2007819
      Expr2026059
    Drives_construct: WBCnstr00029753
    Construct_product: WBCnstr00029753
    Microarray_results (16)
    Expression_cluster (129)
    Interaction: WBInteraction000050717
      WBInteraction000118967
      WBInteraction000124205
      WBInteraction000134408
      WBInteraction000135289
      WBInteraction000135407
      WBInteraction000138343
      WBInteraction000140160
      WBInteraction000141040
      WBInteraction000141369
      WBInteraction000143032
      WBInteraction000143672
      WBInteraction000143839
      WBInteraction000145115
      WBInteraction000145383
      WBInteraction000148777
      WBInteraction000151620
      WBInteraction000157727
      WBInteraction000161125
      WBInteraction000168724
      WBInteraction000171554
      WBInteraction000176730
      WBInteraction000177385
      WBInteraction000177607
      WBInteraction000179987
      WBInteraction000181229
      WBInteraction000183594
      WBInteraction000183699
      WBInteraction000187566
      WBInteraction000189528
      WBInteraction000189613
      WBInteraction000190776
      WBInteraction000190886
      WBInteraction000191497
      WBInteraction000193462
      WBInteraction000193784
      WBInteraction000193989
      WBInteraction000196258
      WBInteraction000198514
      WBInteraction000199157
      WBInteraction000199792
      WBInteraction000202565
      WBInteraction000206501
      WBInteraction000207421
      WBInteraction000210057
      WBInteraction000210574
      WBInteraction000215244
      WBInteraction000215697
      WBInteraction000216517
      WBInteraction000216925
      WBInteraction000221514
      WBInteraction000221981
      WBInteraction000222990
      WBInteraction000223637
      WBInteraction000223788
      WBInteraction000223798
      WBInteraction000225006
      WBInteraction000225019
      WBInteraction000226658
      WBInteraction000227379
      WBInteraction000227519
      WBInteraction000228523
      WBInteraction000229826
      WBInteraction000233658
      WBInteraction000235357
      WBInteraction000235630
      WBInteraction000236456
      WBInteraction000237271
      WBInteraction000237283
      WBInteraction000237351
      WBInteraction000239674
      WBInteraction000240224
      WBInteraction000242457
      WBInteraction000245231
      WBInteraction000246926
      WBInteraction000247314
      WBInteraction000247964
      WBInteraction000249787
      WBInteraction000251194
      WBInteraction000252152
      WBInteraction000252926
      WBInteraction000256510
      WBInteraction000256812
      WBInteraction000260432
      WBInteraction000261743
      WBInteraction000261878
      WBInteraction000263827
      WBInteraction000264572
      WBInteraction000266524
      WBInteraction000266803
      WBInteraction000268248
      WBInteraction000271637
      WBInteraction000278531
      WBInteraction000284055
      WBInteraction000291527
      WBInteraction000294002
      WBInteraction000296072
      WBInteraction000298326
      WBInteraction000299747
      WBInteraction000300460
      WBInteraction000301553
      WBInteraction000301611
      WBInteraction000303068
      WBInteraction000304010
      WBInteraction000304508
      WBInteraction000305167
      WBInteraction000306194
      WBInteraction000306518
      WBInteraction000310168
      WBInteraction000316671
      WBInteraction000318139
      WBInteraction000321957
      WBInteraction000323107
      WBInteraction000323753
      WBInteraction000323755
      WBInteraction000324409
      WBInteraction000324791
      WBInteraction000328751
      WBInteraction000330578
      WBInteraction000331694
      WBInteraction000333843
      WBInteraction000334238
      WBInteraction000334477
      WBInteraction000334937
      WBInteraction000341633
      WBInteraction000343097
      WBInteraction000344299
      WBInteraction000345145
      WBInteraction000345842
      WBInteraction000346184
      WBInteraction000347419
      WBInteraction000354402
      WBInteraction000358044
      WBInteraction000358557
      WBInteraction000362477
      WBInteraction000362710
      WBInteraction000366855
      WBInteraction000372387
      WBInteraction000377307
      WBInteraction000378732
      WBInteraction000383916
      WBInteraction000386440
      WBInteraction000387517
      WBInteraction000391399
      WBInteraction000394110
      WBInteraction000394557
      WBInteraction000397380
      WBInteraction000401060
      WBInteraction000402180
      WBInteraction000412568
      WBInteraction000415459
      WBInteraction000416540
      WBInteraction000416874
      WBInteraction000425281
      WBInteraction000430048
      WBInteraction000432011
      WBInteraction000438281
      WBInteraction000441768
      WBInteraction000444204
      WBInteraction000445869
      WBInteraction000446471
      WBInteraction000452298
      WBInteraction000459338
  Map_info: Positive: Positive_clone: Y52B11B Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 6.65453
  Method: Gene