WormBase Tree Display for Gene: WBGene00013117
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| WBGene00013117 | SMap | S_parent | Sequence | Y51H4A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y51H4A.23 | |||||||
| Molecular_name | Y51H4A.23 | ||||||||
| Y51H4A.23.1 | |||||||||
| CE54267 | |||||||||
| Other_name | CELE_Y51H4A.23 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y51H4A.23 | ||||||||
| DB_info | Database | AceView | gene | 4R661 | |||||
| WormQTL | gene | WBGene00013117 | |||||||
| WormFlux | gene | WBGene00013117 | |||||||
| NDB | locus_tag | CELE_Y51H4A.23 | |||||||
| NCBI | gene | 190158 | |||||||
| RefSeq | protein | NM_001392451.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322605 | |||||||
| TrEMBL | UniProtAcc | A0A8D6XJG8 | |||||||
| UniProt_GCRP | UniProtAcc | A0A8D6XJG8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00007998 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00013116 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00014238 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00014239 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00020356 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Is affected by wdr-23 and set-2 based on RNA-seq studies. Is affected by Sirolimus based on microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y51H4A.23 | |||||||
| Corresponding_CDS_history | Y51H4A.23:wp279 | ||||||||
| Corresponding_transcript | Y51H4A.23.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00057186 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1012292 | ||||||||
| Expr1160619 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster | WBPaper00042215:wdr-23(tm1817)_downregulated | ||||||||
| WBPaper00060014:set-2(tm1630)_upregulated | |||||||||
| WBPaper00061527:sre-33-ZK1025.1_8337 | |||||||||
| WBPaper00031003:hlh_1_enriched | |||||||||
| WBPaper00048989:eat-2(ad465)_rapamycin_upregulated | |||||||||
| SAGE_tag | SAGE:accgtgcaaa | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:gagcaggatc | Strand | Antisense | |||||||
| SAGE:ggtttaggtt | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Map_info | Positive | Positive_clone | Y51H4A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 15.2893 | |||||||
| Method | Gene |
