WormBase Tree Display for Gene: WBGene00013008
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| WBGene00013008 | SMap | S_parent | Sequence | Y48E1B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-146 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | Y48E1B.9 | ||||||||
| Molecular_name | Y48E1B.9a | ||||||||
| Y48E1B.9a.1 | |||||||||
| CE36239 | |||||||||
| Y48E1B.9b | |||||||||
| CE43324 | |||||||||
| Y48E1B.9b.1 | |||||||||
| Other_name | CELE_Y48E1B.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | clec-146 | ||||||||
| DB_info | Database | AceView | gene | 2N882 | |||||
| WormQTL | gene | WBGene00013008 | |||||||
| WormFlux | gene | WBGene00013008 | |||||||
| NDB | locus_tag | CELE_Y48E1B.9 | |||||||
| NCBI | gene | 175004 | |||||||
| RefSeq | protein | NM_001267473.3 | |||||||
| NM_001267472.3 | |||||||||
| TrEMBL | UniProtAcc | B7WNB3 | |||||||
| O18202 | |||||||||
| UniProt_GCRP | UniProtAcc | O18202 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-146 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (108) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Paralog | WBGene00009156 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in AFD; dopaminergic neurons; and hypodermis based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq and microarray studies. Is affected by fourteen chemicals including rotenone; stavudine; and Sodium Chloride based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48E1B.9a | |||||||
| Y48E1B.9b | |||||||||
| Corresponding_CDS_history | Y48E1B.9:wp114 | ||||||||
| Corresponding_transcript | Y48E1B.9a.1 | ||||||||
| Y48E1B.9b.1 | |||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf990462 | ||||||||
| WBsf1013663 | |||||||||
| WBsf224188 | |||||||||
| Experimental_info | Expr_pattern | Expr1024669 | |||||||
| Expr1160369 | |||||||||
| Expr2010075 | |||||||||
| Expr2028317 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (201) | |||||||||
| Interaction | WBInteraction000553026 | ||||||||
| Map_info | Map | II | Position | 18.2946 | Error | 0.031844 | |||
| Positive | Positive_clone | Y48E1B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
