WormBase Tree Display for Gene: WBGene00013008
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| WBGene00013008 | SMap | S_parent | Sequence | Y48E1B | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | clec | ||||||
| Allele (108) | |||||||
| RNASeq_FPKM (74) | |||||||
| Ortholog (19) | |||||||
| Paralog | WBGene00009156 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
| Structured_description | Automated_description | Enriched in AFD; dopaminergic neurons; and hypodermis based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq and microarray studies. Is affected by fourteen chemicals including rotenone; stavudine; and Sodium Chloride based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | Y48E1B.9a | |||||
| Y48E1B.9b | |||||||
| Corresponding_CDS_history | Y48E1B.9:wp114 | ||||||
| Corresponding_transcript | Y48E1B.9a.1 | ||||||
| Y48E1B.9b.1 | |||||||
| Other_sequence (15) | |||||||
| Associated_feature | WBsf990462 | ||||||
| WBsf1013663 | |||||||
| WBsf224188 | |||||||
| Experimental_info | Expr_pattern | Expr1024669 | |||||
| Expr1160369 | |||||||
| Expr2010075 | |||||||
| Expr2028317 | |||||||
| Microarray_results (14) | |||||||
| Expression_cluster (201) | |||||||
| Interaction | WBInteraction000553026 | ||||||
| Map_info | Map | II | Position | 18.2946 | Error | 0.031844 | |
| Positive | Positive_clone | Y48E1B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
