WormBase Tree Display for Gene: WBGene00012988
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WBGene00012988 | SMap | S_parent | Sequence | Y48C3A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ztf-22 | Person_evidence | WBPerson1997 | |||||
Sequence_name | Y48C3A.4 | ||||||||
Molecular_name | Y48C3A.4a | ||||||||
Y48C3A.4a.1 | |||||||||
CE22135 | |||||||||
Y48C3A.4b | |||||||||
CE54249 | |||||||||
Y48C3A.4b.1 | |||||||||
Other_name | CELE_Y48C3A.4 | Accession_evidence | NDB | BX284602 | |||||
Public_name | ztf-22 | ||||||||
DB_info | Database | AceView | gene | 2N570 | |||||
WormQTL | gene | WBGene00012988 | |||||||
SignaLink | protein | WBGene00012988 | |||||||
WormFlux | gene | WBGene00012988 | |||||||
NDB | locus_tag | CELE_Y48C3A.4 | |||||||
NCBI | gene | 174971 | |||||||
RefSeq | protein | NM_064410.4 | |||||||
NM_001393219.1 | |||||||||
TrEMBL | UniProtAcc | Q9NAG7 | |||||||
A0A7R9SUY9 | |||||||||
UniProt_GCRP | UniProtAcc | A0A7R9SUY9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 18 Apr 2008 09:32:24 | WBPerson2970 | Name_change | CGC_name | ztf-22 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ztf | ||||||||
Allele (194) | |||||||||
Strain | WBStrain00037675 | ||||||||
WBStrain00037703 | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (26) | |||||||||
Paralog | WBGene00011661 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Structured_description | Automated_description | Expressed in dorsal nerve cord; head muscle; head neurons; intestine; and ventral nerve cord. Is predicted to encode a protein with the following domain: Zinc finger C2H2-type. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y48C3A.4a | |||||||
Y48C3A.4b | |||||||||
Corresponding_transcript | Y48C3A.4a.1 | ||||||||
Y48C3A.4b.1 | |||||||||
Other_sequence (6) | |||||||||
Associated_feature | WBsf666305 | ||||||||
WBsf666306 | |||||||||
WBsf978777 | |||||||||
WBsf990379 | |||||||||
WBsf990380 | |||||||||
WBsf1013603 | |||||||||
WBsf1013604 | |||||||||
WBsf224152 | |||||||||
WBsf224153 | |||||||||
Transcription_factor | WBTranscriptionFactor001098 | ||||||||
Experimental_info | RNAi_result | WBRNAi00056902 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00107437 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00002217 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037247 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00056901 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037246 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00092048 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (6) | |||||||||
Drives_construct | WBCnstr00012867 | ||||||||
WBCnstr00029774 | |||||||||
Construct_product | WBCnstr00029774 | ||||||||
WBCnstr00038814 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (109) | |||||||||
Interaction | WBInteraction000519928 | ||||||||
WBInteraction000527330 | |||||||||
WBInteraction000528085 | |||||||||
WBInteraction000531323 | |||||||||
WBInteraction000531804 | |||||||||
WBInteraction000532072 | |||||||||
WBInteraction000533790 | |||||||||
WBInteraction000535189 | |||||||||
Map_info | Map | II | Position | 16.34 | Error | 0.051335 | |||
Positive | Positive_clone | Y48C3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00048690 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |