WormBase Tree Display for Gene: WBGene00012988
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WBGene00012988 | SMap | S_parent | Sequence | Y48C3A | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ztf | ||||||
Allele (194) | |||||||
Strain | WBStrain00037675 | ||||||
WBStrain00037703 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (26) | |||||||
Paralog | WBGene00011661 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Structured_description | Automated_description | Expressed in dorsal nerve cord; head muscle; head neurons; intestine; and ventral nerve cord. Is predicted to encode a protein with the following domain: Zinc finger C2H2-type. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y48C3A.4a | |||||
Y48C3A.4b | |||||||
Corresponding_transcript | Y48C3A.4a.1 | ||||||
Y48C3A.4b.1 | |||||||
Other_sequence | CR00694 | ||||||
CRC09852_1 | |||||||
CBC06125_1 | |||||||
ALC00087_1 | |||||||
MH04165 | |||||||
BU585482.1 | |||||||
Associated_feature (9) | |||||||
Transcription_factor | WBTranscriptionFactor001098 | ||||||
Experimental_info | RNAi_result | WBRNAi00056902 | Inferred_automatically | RNAi_primary | |||
WBRNAi00107437 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002217 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037247 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056901 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037246 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00092048 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr7722 | ||||||
Expr1023435 | |||||||
Expr1035764 | |||||||
Expr1160350 | |||||||
Expr2018194 | |||||||
Expr2036331 | |||||||
Drives_construct | WBCnstr00012867 | ||||||
WBCnstr00029774 | |||||||
Construct_product | WBCnstr00029774 | ||||||
WBCnstr00038814 | |||||||
Microarray_results (20) | |||||||
Expression_cluster (109) | |||||||
Interaction | WBInteraction000519928 | ||||||
WBInteraction000527330 | |||||||
WBInteraction000528085 | |||||||
WBInteraction000531323 | |||||||
WBInteraction000531804 | |||||||
WBInteraction000532072 | |||||||
WBInteraction000533790 | |||||||
WBInteraction000535189 | |||||||
Map_info | Map | II | Position | 16.34 | Error | 0.051335 | |
Positive | Positive_clone | Y48C3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00048690 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |