WormBase Tree Display for Gene: WBGene00012972
expand all nodes | collapse all nodes | view schema
| WBGene00012972 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rsa-2 | Person_evidence | WBPerson283 | |||||
| Sequence_name | Y48A6B.11 | ||||||||
| Molecular_name | Y48A6B.11a | ||||||||
| Y48A6B.11a.1 | |||||||||
| CE24379 | |||||||||
| Y48A6B.11c | |||||||||
| CE54304 | |||||||||
| Y48A6B.11c.1 | |||||||||
| Other_name | CELE_Y48A6B.11 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | rsa-2 | ||||||||
| DB_info | Database | AceView | gene | 3M157 | |||||
| WormQTL | gene | WBGene00012972 | |||||||
| WormFlux | gene | WBGene00012972 | |||||||
| NDB | locus_tag | CELE_Y48A6B.11 | |||||||
| NCBI | gene | 176536 | |||||||
| RefSeq | protein | NM_001395774.1 | |||||||
| NM_001027715.3 | |||||||||
| SwissProt | UniProtAcc | G5EFV3 | |||||||
| TrEMBL | UniProtAcc | A0A7R9SUN5 | |||||||
| UniProt_GCRP | UniProtAcc | G5EFV3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Feb 2007 09:34:11 | WBPerson2970 | Name_change | CGC_name | rsa-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rsa | ||||||||
| Allele (93) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Contained_in_operon | CEOP3716 | ||||||||
| Ortholog (19) | |||||||||
| Structured_description | Automated_description | Enables beta-catenin binding activity and protein-macromolecule adaptor activity. Involved in embryonic digestive tract development; mitotic spindle organization; and protein localization to organelle. Located in centrosome. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48A6B.11a | |||||||
| Y48A6B.11c | |||||||||
| Corresponding_CDS_history | Y48A6B.11b:wp279 | ||||||||
| Corresponding_transcript | Y48A6B.11a.1 | ||||||||
| Y48A6B.11c.1 | |||||||||
| Other_sequence | CRC04471_1 | ||||||||
| CBC09730_1 | |||||||||
| CRC04382_1 | |||||||||
| CR03366 | |||||||||
| MH04799 | |||||||||
| Associated_feature | WBsf645599 | ||||||||
| WBsf659564 | |||||||||
| WBsf659565 | |||||||||
| WBsf981584 | |||||||||
| WBsf994255 | |||||||||
| WBsf1015919 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00009347 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00026747 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056859 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037215 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4520 | ||||||||
| Expr4521 | |||||||||
| Expr12866 | |||||||||
| Expr1023560 | |||||||||
| Expr1035752 | |||||||||
| Expr1160312 | |||||||||
| Expr2015547 | |||||||||
| Expr2033782 | |||||||||
| Drives_construct | WBCnstr00022914 | ||||||||
| Construct_product | WBCnstr00022914 | ||||||||
| Antibody | WBAntibody00001218 | ||||||||
| WBAntibody00001219 | |||||||||
| WBAntibody00002962 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (183) | |||||||||
| Interaction (35) | |||||||||
| Map_info | Map | III | Position | 5.88345 | Error | 0.005495 | |||
| Positive | Positive_clone | Y48A6B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028993 | ||||||||
| WBPaper00032092 | |||||||||
| WBPaper00043631 | |||||||||
| WBPaper00045606 | |||||||||
| WBPaper00046623 | |||||||||
| WBPaper00047475 | |||||||||
| WBPaper00048324 | |||||||||
| WBPaper00051102 | |||||||||
| WBPaper00052241 | |||||||||
| WBPaper00057728 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
