WormBase Tree Display for Gene: WBGene00012972
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WBGene00012972 | SMap | S_parent | Sequence | CHROMOSOME_III | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | rsa-2 | Person_evidence | WBPerson283 | |||
Sequence_name | Y48A6B.11 | ||||||
Molecular_name | Y48A6B.11a | ||||||
Y48A6B.11a.1 | |||||||
CE24379 | |||||||
Y48A6B.11c | |||||||
CE54304 | |||||||
Y48A6B.11c.1 | |||||||
Other_name | CELE_Y48A6B.11 | Accession_evidence | NDB | BX284603 | |||
Public_name | rsa-2 | ||||||
DB_info | Database | AceView | gene | 3M157 | |||
WormQTL | gene | WBGene00012972 | |||||
WormFlux | gene | WBGene00012972 | |||||
NDB | locus_tag | CELE_Y48A6B.11 | |||||
NCBI | gene | 176536 | |||||
RefSeq | protein | NM_001395774.1 | |||||
NM_001027715.3 | |||||||
SwissProt | UniProtAcc | G5EFV3 | |||||
TrEMBL | UniProtAcc | A0A7R9SUN5 | |||||
UniProt_GCRP | UniProtAcc | G5EFV3 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rsa | ||||||
Allele (93) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (14) | |||||||
Contained_in_operon | CEOP3716 | ||||||
Ortholog (19) | |||||||
Structured_description | Automated_description | Enables beta-catenin binding activity and protein-macromolecule adaptor activity. Involved in embryonic digestive tract development; mitotic spindle organization; and protein localization to organelle. Located in centrosome. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y48A6B.11a | |||||
Y48A6B.11c | |||||||
Corresponding_CDS_history | Y48A6B.11b:wp279 | ||||||
Corresponding_transcript | Y48A6B.11a.1 | ||||||
Y48A6B.11c.1 | |||||||
Other_sequence | CRC04471_1 | ||||||
CBC09730_1 | |||||||
CRC04382_1 | |||||||
CR03366 | |||||||
MH04799 | |||||||
Associated_feature | WBsf645599 | ||||||
WBsf659564 | |||||||
WBsf659565 | |||||||
WBsf981584 | |||||||
WBsf994255 | |||||||
WBsf1015919 | |||||||
Experimental_info | RNAi_result | WBRNAi00009347 | Inferred_automatically | RNAi_primary | |||
WBRNAi00026747 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056859 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037215 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr4520 | ||||||
Expr4521 | |||||||
Expr12866 | |||||||
Expr1023560 | |||||||
Expr1035752 | |||||||
Expr1160312 | |||||||
Expr2015547 | |||||||
Expr2033782 | |||||||
Drives_construct | WBCnstr00022914 | ||||||
Construct_product | WBCnstr00022914 | ||||||
Antibody | WBAntibody00001218 | ||||||
WBAntibody00001219 | |||||||
WBAntibody00002962 | |||||||
Microarray_results (25) | |||||||
Expression_cluster (183) | |||||||
Interaction (35) | |||||||
Map_info | Map | III | Position | 5.88345 | Error | 0.005495 | |
Positive | Positive_clone | Y48A6B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00028993 | ||||||
WBPaper00032092 | |||||||
WBPaper00043631 | |||||||
WBPaper00045606 | |||||||
WBPaper00046623 | |||||||
WBPaper00047475 | |||||||
WBPaper00048324 | |||||||
WBPaper00051102 | |||||||
WBPaper00052241 | |||||||
WBPaper00057728 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |