WormBase Tree Display for Gene: WBGene00012889
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| WBGene00012889 | SMap | S_parent | Sequence | Y45F10D | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | icap-1 | Person_evidence | WBPerson137 | |||||
| Sequence_name | Y45F10D.10 | ||||||||
| Molecular_name | Y45F10D.10a | ||||||||
| Y45F10D.10a.1 | |||||||||
| CE41280 | |||||||||
| Y45F10D.10b | |||||||||
| CE44556 | |||||||||
| Y45F10D.10b.1 | |||||||||
| Other_name | CELE_Y45F10D.10 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | icap-1 | ||||||||
| DB_info | Database | AceView | gene | 4O550 | |||||
| WormQTL | gene | WBGene00012889 | |||||||
| WormFlux | gene | WBGene00012889 | |||||||
| NDB | locus_tag | CELE_Y45F10D.10 | |||||||
| NCBI | gene | 189926 | |||||||
| RefSeq | protein | NM_001268829.4 | |||||||
| NM_001268828.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF105393 | |||||||
| TrEMBL | UniProtAcc | O62480 | |||||||
| D3NQ97 | |||||||||
| UniProt_GCRP | UniProtAcc | O62480 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2018 11:56:16 | WBPerson1983 | Name_change | CGC_name | icap-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | icap | ||||||||
| Allele (27) | |||||||||
| Strain | WBStrain00037193 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00007372 | ||||||||
| Contained_in_operon | CEOP4564 | ||||||||
| Ortholog (22) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in integrin-mediated signaling pathway. Is an ortholog of human ITGB1BP1 (integrin subunit beta 1 binding protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y45F10D.10a | |||||||
| Y45F10D.10b | |||||||||
| Corresponding_CDS_history | Y45F10D.10:wp177 | ||||||||
| Corresponding_transcript | Y45F10D.10a.1 | ||||||||
| Y45F10D.10b.1 | |||||||||
| Associated_feature | WBsf652355 | ||||||||
| WBsf231167 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020607 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056595 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00065068 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023112 | ||||||||
| Expr1160062 | |||||||||
| Expr2007546 | |||||||||
| Expr2025782 | |||||||||
| Drives_construct | WBCnstr00029798 | ||||||||
| Construct_product | WBCnstr00029798 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (87) | |||||||||
| Interaction | WBInteraction000179777 | ||||||||
| WBInteraction000560396 | |||||||||
| Map_info | Map | IV | Position | 10.8581 | |||||
| Positive | Positive_clone | Y45F10D | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
