WormBase Tree Display for Gene: WBGene00012717
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| WBGene00012717 | SMap | S_parent | Sequence | Y39E4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y39E4B.6 | |||||||
| Molecular_name | Y39E4B.6a | ||||||||
| Y39E4B.6a.1 | |||||||||
| CE21718 | |||||||||
| Y39E4B.6b | |||||||||
| CE47624 | |||||||||
| Y39E4B.6b.1 | |||||||||
| Other_name | CELE_Y39E4B.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y39E4B.6 | ||||||||
| DB_info | Database | AceView | gene | 3O163 | |||||
| WormQTL | gene | WBGene00012717 | |||||||
| WormFlux | gene | WBGene00012717 | |||||||
| NDB | locus_tag | CELE_Y39E4B.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012717|UniProtKB=Q9U2K4 | |||||||
| family | PTHR13469 | ||||||||
| NCBI | gene | 176728 | |||||||
| RefSeq | protein | NM_067309.7 | |||||||
| NM_001392222.1 | |||||||||
| TrEMBL | UniProtAcc | Q9U2K4 | |||||||
| I2HAG3 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9U2K4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (69) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (22) | |||||||||
| Structured_description | Concise_description | Y39E4B.6 is involved in cell migration; Y39E4B.6 is predicted to have cyclin-dependent protein serine/threonine kinase (cdk-9, cit-1.1 or cit-1.2) inhibitor activity and snRNA binding activity, based on protein domain information; physical interaction with cit-1.2 protein based on yeast 2-hybrid. | Paper_evidence | WBPaper00036192 | |||||
| WBPaper00005544 | |||||||||
| WBPaper00036375 | |||||||||
| WBPaper00045521 | |||||||||
| WBPaper00045688 | |||||||||
| WBPaper00045689 | |||||||||
| Person_evidence | WBPerson22134 | ||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 17 Oct 2016 00:00:00 | ||||||||
| Automated_description | Predicted to enable 7SK snRNA binding activity and cyclin-dependent protein serine/threonine kinase inhibitor activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in cytoplasm and nucleoplasm. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39E4B.6a | |||||||
| Y39E4B.6b | |||||||||
| Corresponding_transcript | Y39E4B.6a.1 | ||||||||
| Y39E4B.6b.1 | |||||||||
| Other_sequence | JI248177.1 | ||||||||
| ES564115.1 | |||||||||
| JI230328.1 | |||||||||
| TSC07090_1 | |||||||||
| Associated_feature (35) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020405 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036949 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056248 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006875 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023912 | ||||||||
| Expr1035627 | |||||||||
| Expr1159732 | |||||||||
| Expr2007389 | |||||||||
| Expr2025624 | |||||||||
| Drives_construct | WBCnstr00029860 | ||||||||
| Construct_product | WBCnstr00029860 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction (27) | |||||||||
| Map_info | Positive | Positive_clone | Y39E4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 20.7607 | |||||||
| Method | Gene |
