WormBase Tree Display for Gene: WBGene00012639
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| WBGene00012639 | SMap | S_parent | Sequence | Y38H8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fezf-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | Y38H8A.5 | ||||||||
| Molecular_name | Y38H8A.5 | ||||||||
| Y38H8A.5.1 | |||||||||
| CE40825 | |||||||||
| Other_name | CELE_Y38H8A.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | fezf-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 May 2013 15:28:52 | WBPerson2970 | Name_change | CGC_name | fezf-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fezf | ||||||||
| Allele (84) | |||||||||
| Strain | WBStrain00037904 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00037879 | ||||||||
| 00037880 | |||||||||
| 00037881 | |||||||||
| 00037882 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00003909 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00009937 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00022762 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017430 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015138 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00009508 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | The Y38H8A.5 gene encodes a homolog of the human gene ZNF195 (or p57KIP2), which when mutated leads to Beckwith-Wiedemann syndrome (OMIM:130650). | Paper_evidence | WBPaper00004637 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 22 with or without anosmia. Is an ortholog of human FEZF1 (FEZ family zinc finger 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0090081 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:22788) | ||||
| Molecular_info | Corresponding_CDS | Y38H8A.5 | |||||||
| Corresponding_CDS_history | Y38H8A.5:wp173 | ||||||||
| Corresponding_transcript | Y38H8A.5.1 | ||||||||
| Other_sequence | BXC06505_1 | ||||||||
| JI182393.1 | |||||||||
| EF066630.1 | |||||||||
| Associated_feature | WBsf659853 | ||||||||
| WBsf998413 | |||||||||
| WBsf998414 | |||||||||
| WBsf1018538 | |||||||||
| Transcription_factor | WBTranscriptionFactor000858 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020337 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00070203 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056089 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020336 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056088 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027661 | ||||||||
| Expr1159611 | |||||||||
| Expr2011754 | |||||||||
| Expr2029992 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (53) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Map | IV | Position | 9.28073 | |||||
| Positive | Positive_clone | Y38H8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00017584 | ||||||||
| WBPaper00035160 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
