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WormBase Tree Display for Gene: WBGene00012600

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Name Class

WBGene00012600SMapS_parentSequenceY38E10A
IdentityVersion2
NameSequence_nameY38E10A.22
Molecular_nameY38E10A.22a
Y38E10A.22a.1
CE47846
Y38E10A.22b
CE35653
Y38E10A.22c
CE47962
Y38E10A.22b.1
Y38E10A.22c.1
Other_nameCELE_Y38E10A.22Accession_evidenceNDBBX284602
Public_nameY38E10A.22
DB_infoDatabaseAceViewgene2M958
WormQTLgeneWBGene00012600
WormFluxgeneWBGene00012600
NDBlocus_tagCELE_Y38E10A.22
PanthergeneCAEEL|WormBase=WBGene00012600|UniProtKB=H2KMK6
familyPTHR19316
NCBIgene189667
RefSeqproteinNM_001267424.3
NM_001267423.6
NM_001267425.4
TREEFAMTREEFAM_IDTF343318
TrEMBLUniProtAccE8MDV8
Q9NAI9
H2KMK6
UniProt_GCRPUniProtAccH2KMK6
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
217 Oct 2011 15:07:28WBPerson1983EventAcquires_mergeWBGene00012601
Acquires_mergeWBGene00012601
StatusLive
Gene_infoBiotypeSO:0001217
Allele (199)
RNASeq_FPKM (74)
GO_annotation00008412
00008413
OrthologWBGene00031746Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WBGene00059607Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00142997Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00160254Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00213079Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00113524Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00160606Caenorhabditis brenneriFrom_analysisWormBase-Compara
CSP26.g14926Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15921Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13111Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16952Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16039Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g14309Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3922Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3908Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14954Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00647.g13979Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02225.g25511Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_05595.g35267Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_12965.g40762Caenorhabditis sinicaFrom_analysisWormBase-Compara
chrII_pilon.g6237Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00211625Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable adenyl-nucleotide exchange factor activity. Predicted to be located in endoplasmic reticulum.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY38E10A.22a
Y38E10A.22b
Y38E10A.22c
Corresponding_CDS_historyY38E10A.22:wp109
Y38E10A.22a:wp234
Y38E10A.22c:wp234
Corresponding_transcriptY38E10A.22a.1
Y38E10A.22b.1
Y38E10A.22c.1
Other_sequenceCRC01068_1
CR02586
Associated_featureWBsf650664
WBsf666262
WBsf990171
WBsf1013478
WBsf224089
WBsf224090
WBsf224091
Experimental_infoRNAi_resultWBRNAi00056022Inferred_automaticallyRNAi_primary
WBRNAi00020289Inferred_automaticallyRNAi_primary
WBRNAi00036845Inferred_automaticallyRNAi_primary
Expr_patternExpr1024621
Expr1035572
Expr1159541
Expr2007302
Expr2025535
Microarray_results (27)
Expression_cluster (127)
InteractionWBInteraction000539677
WBInteraction000557819
WBInteraction000559581
WBInteraction000568036
WBInteraction000568775
WBInteraction000574129
WBInteraction000574892
WBInteraction000583847
WBInteraction000584177
Map_infoPositivePositive_cloneY38E10AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII10.6818
MethodGene