WormBase Tree Display for Gene: WBGene00012597
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WBGene00012597 | SMap | S_parent | Sequence | Y38E10A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nhr-235 | Person_evidence | WBPerson600 | |||||
Sequence_name | Y38E10A.19 | ||||||||
Molecular_name | Y38E10A.19 | ||||||||
Y38E10A.19.1 | |||||||||
CE21599 | |||||||||
Other_name | CELE_Y38E10A.19 | Accession_evidence | NDB | BX284602 | |||||
Public_name | nhr-235 | ||||||||
DB_info | Database | AceView | gene | 2M933 | |||||
WormQTL | gene | WBGene00012597 | |||||||
WormFlux | gene | WBGene00012597 | |||||||
NDB | locus_tag | CELE_Y38E10A.19 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012597|UniProtKB=Q9NAJ2 | |||||||
family | PTHR46397 | ||||||||
NCBI | gene | 189664 | |||||||
RefSeq | protein | NM_064301.2 | |||||||
TREEFAM | TREEFAM_ID | TF321941 | |||||||
TrEMBL | UniProtAcc | Q9NAJ2 | |||||||
UniProt_GCRP | UniProtAcc | Q9NAJ2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-235 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (61) | |||||||||
Strain | WBStrain00037250 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00096125 | ||||||||
Ortholog | WBGene00059601 | Caenorhabditis remanei | From_analysis | TreeFam | |||||
Csp11.Scaffold590.g5102 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
chrII_pilon.g6233 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (33) | |||||||||
Structured_description | Automated_description | Predicted to be located in nucleus. Expressed in neurons. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y38E10A.19 | |||||||
Corresponding_transcript | Y38E10A.19.1 | ||||||||
Associated_feature | WBsf990157 | ||||||||
WBsf990158 | |||||||||
WBsf1013467 | |||||||||
WBsf1013468 | |||||||||
Experimental_info | RNAi_result | WBRNAi00056018 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036844 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr7907 | ||||||||
Expr1028339 | |||||||||
Expr1159537 | |||||||||
Drives_construct | WBCnstr00012984 | ||||||||
WBCnstr00029889 | |||||||||
Construct_product | WBCnstr00029889 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (106) | |||||||||
Interaction | WBInteraction000547207 | ||||||||
Map_info | Map | II | Position | 10.6451 | Error | 0.014372 | |||
Positive | Positive_clone | Y38E10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00062515 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |