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WormBase Tree Display for Gene: WBGene00012597

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Name Class

WBGene00012597SMapS_parentSequenceY38E10A
IdentityVersion2
NameCGC_namenhr-235Person_evidenceWBPerson600
Sequence_nameY38E10A.19
Molecular_nameY38E10A.19
Y38E10A.19.1
CE21599
Other_nameCELE_Y38E10A.19Accession_evidenceNDBBX284602
Public_namenhr-235
DB_infoDatabaseAceViewgene2M933
WormQTLgeneWBGene00012597
WormFluxgeneWBGene00012597
NDBlocus_tagCELE_Y38E10A.19
PanthergeneCAEEL|WormBase=WBGene00012597|UniProtKB=Q9NAJ2
familyPTHR46397
NCBIgene189664
RefSeqproteinNM_064301.2
TREEFAMTREEFAM_IDTF321941
TrEMBLUniProtAccQ9NAJ2
UniProt_GCRPUniProtAccQ9NAJ2
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
222 Jul 2005 10:29:12WBPerson2970Name_changeCGC_namenhr-235
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (61)
StrainWBStrain00037250
RNASeq_FPKM (74)
GO_annotation00096125
OrthologWBGene00059601Caenorhabditis remaneiFrom_analysisTreeFam
Csp11.Scaffold590.g5102Caenorhabditis tropicalisFrom_analysisWormBase-Compara
chrII_pilon.g6233Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (33)
Structured_descriptionAutomated_descriptionPredicted to be located in nucleus. Expressed in neurons.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY38E10A.19
Corresponding_transcriptY38E10A.19.1
Associated_featureWBsf990157
WBsf990158
WBsf1013467
WBsf1013468
Experimental_infoRNAi_resultWBRNAi00056018Inferred_automaticallyRNAi_primary
WBRNAi00036844Inferred_automaticallyRNAi_primary
Expr_patternExpr7907
Expr1028339
Expr1159537
Drives_constructWBCnstr00012984
WBCnstr00029889
Construct_productWBCnstr00029889
Microarray_results (18)
Expression_cluster (106)
InteractionWBInteraction000547207
Map_infoMapIIPosition10.6451Error0.014372
PositivePositive_cloneY38E10AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00062515
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene