WormBase Tree Display for Gene: WBGene00012560
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| WBGene00012560 | SMap | S_parent | Sequence | Y37D8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y37D8A.25 | |||||||
| Molecular_name | Y37D8A.25 | ||||||||
| Y37D8A.25.1 | |||||||||
| CE35072 | |||||||||
| Other_name | CELE_Y37D8A.25 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y37D8A.25 | ||||||||
| DB_info | Database | AceView | gene | 3N914 | |||||
| WormQTL | gene | WBGene00012560 | |||||||
| WormFlux | gene | WBGene00012560 | |||||||
| NDB | locus_tag | CELE_Y37D8A.25 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012560|UniProtKB=Q7YTJ3 | |||||||
| family | PTHR22902 | ||||||||
| NCBI | gene | 3565405 | |||||||
| RefSeq | protein | NM_001027662.3 | |||||||
| TREEFAM | TREEFAM_ID | TF331914 | |||||||
| TrEMBL | UniProtAcc | Q7YTJ3 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YTJ3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (36) | |||||||||
| Structured_description | Automated_description | Enriched in AFD; MSpaaapa; germ line; and intestine based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including pgl-1; alg-1; and gld-2 based on tiling array; RNA-seq; and microarray studies. Is affected by four chemicals including hydrogen sulfide; Zidovudine; and Rifampin based on microarray and RNA-seq studies. Human PHETA1 enables protein homodimerization activity. Is predicted to encode a protein with the following domains: PH domain containing protein Boi1/Boi2-like; PH-like domain superfamily; Pleckstrin homology domain; and PH domain. Is an ortholog of human PHETA1 (PH domain containing endocytic trafficking adaptor 1); PHETA2 (PH domain containing endocytic trafficking adaptor 2); and PLEKHJ1 (pleckstrin homology domain containing J1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y37D8A.25 | |||||||
| Corresponding_transcript | Y37D8A.25.1 | ||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf651554 | ||||||||
| WBsf667546 | |||||||||
| WBsf667547 | |||||||||
| WBsf667548 | |||||||||
| WBsf227687 | |||||||||
| Experimental_info | Expr_pattern | Expr1013461 | |||||||
| Expr1035562 | |||||||||
| Expr1159408 | |||||||||
| Expr2007242 | |||||||||
| Expr2025473 | |||||||||
| Drives_construct | WBCnstr00029905 | ||||||||
| Construct_product | WBCnstr00029905 | ||||||||
| Microarray_results | A_12_P110046 | ||||||||
| GPL13394_WBGene00012560 | |||||||||
| GPL13914_Y37D8A.25 | |||||||||
| GPL14144_Y37D8A.25_115-174_0.951_1_A | |||||||||
| GPL19516_CGZ0044340 | |||||||||
| GPL21109_Y37D8A.25 | |||||||||
| GPL8304_CE_WBGene00012560_A | |||||||||
| GPL8673_Y37D8A_25P00079 | |||||||||
| GPL8673_Y37D8A_25P00084 | |||||||||
| GPL8673_Y37D8A_25P00310 | |||||||||
| Expression_cluster (52) | |||||||||
| Interaction | WBInteraction000172347 | ||||||||
| WBInteraction000462866 | |||||||||
| Map_info | Positive | Positive_clone | Y37D8A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 19.0448 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
