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WormBase Tree Display for Gene: WBGene00012471

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Name Class

WBGene00012471SMapS_parentSequenceY17G7B
Identity (6)
Gene_infoBiotypeSO:0001217
Allele (81)
RNASeq_FPKM (74)
Contained_in_operonCEOP2582
Ortholog (21)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABalpapaap; AVK; germ line; pharyngeal neurons; and sensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-12; hsf-1; and gld-1 based on microarray and RNA-seq studies. Is affected by five chemicals including Aspirin; Rifampin; and paraquat based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY17G7B.20a
Y17G7B.20b
Y17G7B.20c
Corresponding_CDS_historyY17G7B.20d:wp275
Y17G7B.20e:wp275
Corresponding_transcriptY17G7B.20a.1
Y17G7B.20a.2
Y17G7B.20a.3
Y17G7B.20b.1
Y17G7B.20c.1
Y17G7B.20c.2
Y17G7B.20c.3
Other_sequence (36)
Associated_featureWBsf650638
WBsf666218
WBsf976371
WBsf976372
WBsf976373
WBsf224019
WBsf224020
WBsf224021
WBsf224022
Experimental_infoRNAi_resultWBRNAi00107416Inferred_automaticallyRNAi_primary
WBRNAi00002080Inferred_automaticallyRNAi_primary
Expr_patternExpr1015314
Expr1035522
Expr1159084
Expr2007109
Expr2025337
Microarray_results (19)
Expression_clusterWBPaper00027339:daf-12(rh273)_upregulated
WBPaper00032528:L3_enriched
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037682:sma-2_upregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:bodywall-muscle_larva_enriched
WBPaper00037950:coelomocytes_larva_enriched
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00038168:lin-35_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Oogenic
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00045974:NSM_enriched_DSN-treated_RNAseq
WBPaper00048988:neuron_expressed
WBPaper00049217:TCER-1_downregulated
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050234:lin-28(RNAi)_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050496:unc-39(hp701)_regulated
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053039:Aspirin_upregulated
WBPaper00053289:DREAM-target
WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053814:15C_downregulated_OP50
WBPaper00053814:15C_downregulated_PY79
WBPaper00055334:DLC-1_interacting
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055565:AVK_enriched
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055648:germline_expressed
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:set-2(bn129)_downregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058725:sftb-1(cer39)_upregulated
WBPaper00059174:MEG-3_interacting
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059987:Wounding_upregulated
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060871:M.humicola-infection_48h_regulated
WBPaper00061340:ASE_parent
WBPaper00061340:Excretory_cell_parent
WBPaper00061340:Parent_of_AMsh_URB
WBPaper00061340:Parent_of_exc_duct_pore_DB_1_3
WBPaper00061340:Parent_of_hyp1V_and_ant_arc_V
WBPaper00061340:Parent_of_hyp3_ILsoDx
WBPaper00061340:RIM_parent
WBPaper00061340:URA_parent
WBPaper00061527:pptr-1-F08D12.1
WBPaper00061651:I4_enriched
WBPaper00061651:M2_enriched
WBPaper00061651:MC_enriched
WBPaper00061651:MI_enriched
WBPaper00062325:etr-1(lq61)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062590:Aging_upregulated_neuron
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064122:vulva_transcriptome
WBPaper00064716:paraquat_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065841:13_0
WBPaper00065945:global-rpoa-2(-)_upregulated_transcript
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031832:slr-2_regulated
WBPaper00032165:differentially_expressed_with_age_medoid_1
WBPaper00035227:heat_shock_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036286:Pattern_F
WBPaper00037695:WC_5-day
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00038172:tax-6null_up_regulated
WBPaper00039866:ClassComp_daf-19_upregulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00041174:environmental
WBPaper00041174:environmental_prime
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-exposed_3h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_3h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00047070:DAF-16-dependent_UV_response
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
WBPaper00055899:nitroguanidine_regulated
InteractionWBInteraction000523808
WBInteraction000533257
WBInteraction000534335
WBInteraction000534536
WBInteraction000534581
WBInteraction000535087
Map_infoPositivePositive_cloneY17G7BInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII5.45193
MethodGene