WormBase Tree Display for Gene: WBGene00012261
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WBGene00012261 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | lpr-3 | Person_evidence | WBPerson637 | |||||
Sequence_name | W04G3.8 | ||||||||
Molecular_name | W04G3.8 | ||||||||
W04G3.8.1 | |||||||||
CE19004 | |||||||||
Other_name | CELE_W04G3.8 | Accession_evidence | NDB | BX284606 | |||||
Public_name | lpr-3 | ||||||||
DB_info | Database | AceView | gene | XL677 | |||||
WormQTL | gene | WBGene00012261 | |||||||
WormFlux | gene | WBGene00012261 | |||||||
NDB | locus_tag | CELE_W04G3.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012261|UniProtKB=G5EEA2 | |||||||
family | PTHR37437 | ||||||||
NCBI | gene | 181295 | |||||||
RefSeq | protein | NM_077448.6 | |||||||
TREEFAM | TREEFAM_ID | TF315575 | |||||||
TrEMBL | UniProtAcc | G5EEA2 | |||||||
UniProt_GCRP | UniProtAcc | G5EEA2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 27 Nov 2007 14:51:19 | WBPerson2970 | Name_change | CGC_name | lpr-3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lpr | ||||||||
Allele (37) | |||||||||
Strain | WBStrain00036906 | ||||||||
WBStrain00035425 | |||||||||
WBStrain00051076 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00015714 | ||||||||
00015715 | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00002393 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00012256 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00012257 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00020571 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description (2) | |||||||||
Molecular_info | Corresponding_CDS | W04G3.8 | |||||||
Corresponding_transcript | W04G3.8.1 | ||||||||
Other_sequence (47) | |||||||||
Associated_feature | WBsf648513 | ||||||||
WBsf663316 | |||||||||
WBsf663317 | |||||||||
WBsf1006895 | |||||||||
WBsf1006896 | |||||||||
WBsf1023805 | |||||||||
WBsf1023806 | |||||||||
WBsf236332 | |||||||||
WBsf236333 | |||||||||
WBsf236334 | |||||||||
Experimental_info | RNAi_result | WBRNAi00114565 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054787 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00036282 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00026489 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00117218 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00094213 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00009253 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr14485 | ||||||||
Expr14486 | |||||||||
Expr15948 | |||||||||
Expr1026373 | |||||||||
Expr1035431 | |||||||||
Expr1158328 | |||||||||
Expr2013261 | |||||||||
Expr2031492 | |||||||||
Drives_construct (3) | |||||||||
Construct_product | WBCnstr00030041 | ||||||||
WBCnstr00040910 | |||||||||
Microarray_results (21) | |||||||||
Expression_cluster (384) | |||||||||
Interaction (108) | |||||||||
Map_info | Map | X | Position | 2.85768 | |||||
Positive | Positive_clone | W04G3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00032973 | ||||||||
WBPaper00048267 | |||||||||
WBPaper00052189 | |||||||||
WBPaper00052963 | |||||||||
WBPaper00062109 | |||||||||
WBPaper00062388 | |||||||||
WBPaper00062715 | |||||||||
WBPaper00063244 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |