WormBase Tree Display for Gene: WBGene00012165

WBGene00012165 SMap: S_parent: Sequence: W01A8
  Identity: Version: 2
    Name: CGC_name: cutl-6 Person_evidence: WBPerson52
      Sequence_name: W01A8.3
      Molecular_name: W01A8.3
        W01A8.3.1
        CE39963
      Other_name: CELE_W01A8.3 Accession_evidence: NDB BX284601
      Public_name: cutl-6
    DB_info: Database: AceView gene 1H643
        WormQTL gene WBGene00012165
        WormFlux gene WBGene00012165
        NDB locus_tag CELE_W01A8.3
        Panther gene CAEEL|WormBase=WBGene00012165|UniProtKB=Q23097
          family PTHR22907
        NCBI gene 189075
        RefSeq protein NM_059599.5
        TREEFAM TREEFAM_ID TF315307
        TrEMBL UniProtAcc Q23097
        UniProt_GCRP UniProtAcc Q23097
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 07 May 2008 10:04:34 WBPerson2970 Name_change: CGC_name: cutl-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cutl
    Allele (21)
    RNASeq_FPKM (74)
    GO_annotation: 00077255
    Ortholog (29)
    Paralog (31)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W01A8.3
    Corresponding_CDS_history: W01A8.3:wp56
      W01A8.3:wp155
    Corresponding_transcript: W01A8.3.1
    Other_sequence: Dviv_isotig20948
      JI174896.1
      Dviv_isotig20947
    Associated_feature: WBsf643421
      WBsf984073
      WBsf1010025
  Experimental_info: RNAi_result: WBRNAi00004354 Inferred_automatically: RNAi_primary
      WBRNAi00054491 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015421
      Expr1035380
      Expr1158039
      Expr2010631
      Expr2028871
    Drives_construct: WBCnstr00030097
    Construct_product: WBCnstr00030097
    Microarray_results (19)
    Expression_cluster: WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00040560:hpl-2_L3_upregulated
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00044736:oscillating_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00045774:clk-1_downregulated
      WBPaper00046121:ecdoderm_unique
      WBPaper00046805:csr-1(RNAi)_upregulated_Set1
      WBPaper00046887:WNT-target
      WBPaper00049377:MWCNT_upregulated
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_24-cell-embryo
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00051558:aging_regulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053771:up_at_24h-NaCl
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00054410:set-9(rw5)_downregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056169:rrf-3(pk1426)_downregulated_L4
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056169:rrf-3(pk1426)_upregulated_L1
      WBPaper00056169:rrf-3(pk1426)_upregulated_L2
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056617:adr-1_upregulated_L4_transcript
      WBPaper00056826:SGP_biased
      WBPaper00057041:spc-1(cas971)_upregulated
      WBPaper00057041:unc-70(cas983)_upregulated
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059735:glucose_upregulated_lpin-1(RNAi)
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060084:cco-1(RNAi)_downregulated_N2
      WBPaper00060445:ikb-1(nr2027)_downregulated_L4
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:ADA_ADE_grandparent
      WBPaper00061340:ADE
      WBPaper00061340:AMsh
      WBPaper00061340:hyp1_hyp2
      WBPaper00061340:hyp3
      WBPaper00061340:ILso
      WBPaper00061340:Neuroblast_ADE_ADA
      WBPaper00061340:Neuroblast_AIZ_FLP
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:mlt-9_22518-F33D4.6_14044
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065984:pals-17(syb3980)_downregulated
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066038:mip-1(how5)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4489_group_20
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_N2
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00027111:rrf-2(ok210)_upregulated
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00034739:N2lessDR1350
      WBPaper00034739:RIL17lessRIL14
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00036286:Pattern_E
      WBPaper00037147:heatshock_upregulated
      WBPaper00038172:aak-2overexpression_down_regulated
      WBPaper00038172:crh-1null_up_regulated
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00048989:N2_allantoin_upregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
      [cgc6390]:male_sex-enriched
    Interaction: WBInteraction000189662
      WBInteraction000198251
      WBInteraction000263440
      WBInteraction000427016
  Map_info: Map: I Position: 1.69153 Error: 0.002778
    Positive: Positive_clone: W01A8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031295
    WBPaper00036109
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene