WormBase Tree Display for Gene: WBGene00011926

WBGene00011926 SMap: S_parent: Sequence: T22C8
  Identity: Version: 2
    Name: CGC_name: sptf-2 Person_evidence: WBPerson291
      Sequence_name: T22C8.5
      Molecular_name: T22C8.5
        T22C8.5.1
        CE02353
      Other_name: CELE_T22C8.5 Accession_evidence: NDB BX284602
      Public_name: sptf-2
    DB_info: Database: AceView gene 2I917
        WormQTL gene WBGene00011926
        WormFlux gene WBGene00011926
        NDB locus_tag CELE_T22C8.5
        Panther gene CAEEL|WormBase=WBGene00011926|UniProtKB=Q22678
          family PTHR23235
        NCBI gene 188733
        RefSeq protein NM_063432.2
        SwissProt UniProtAcc Q22678
        TREEFAM TREEFAM_ID TF315506
        UniProt_GCRP UniProtAcc Q22678
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 15 Dec 2006 15:03:44 WBPerson1847 Name_change: CGC_name: sptf-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sptf
    Allele (53)
    RNASeq_FPKM (74)
    GO_annotation: 00076008
      00076009
      00076010
      00076011
      00076012
      00076013
      00076014
    Ortholog (30)
    Paralog: WBGene00012735 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00003480 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00009743 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00009998 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00018990 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in canonical Wnt signaling pathway. Expressed in head neurons and intestine. Is an ortholog of human SP5 (Sp5 transcription factor). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T22C8.5
    Corresponding_transcript: T22C8.5.1
    Other_sequence: JI460339.1
      OOC03445_1
    Associated_feature: WBsf644490
      WBsf657986
      WBsf988777
      WBsf1012718
      WBsf221793
      WBsf221794
    Transcription_factor: WBTranscriptionFactor000520
  Experimental_info: RNAi_result: WBRNAi00092988 Inferred_automatically: RNAi_primary
      WBRNAi00053818 Inferred_automatically: RNAi_primary
      WBRNAi00035802 Inferred_automatically: RNAi_primary
      WBRNAi00019015 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7673
      Expr11713
      Expr11737
      Expr1026568
      Expr1157365
      Expr2016102
      Expr2034337
    Drives_construct: WBCnstr00012818
      WBCnstr00030276
    Construct_product: WBCnstr00030276
    Microarray_results (19)
    Expression_cluster (127)
    Interaction (17)
  Map_info: Map: II Position: 0.828032 Error: 0.000334
    Positive: Positive_clone: T22C8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00030510
    WBPaper00034496
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene