WormBase Tree Display for Gene: WBGene00011871
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| WBGene00011871 | SMap | S_parent | Sequence | T20G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T20G5.9 | |||||||
| Molecular_name | T20G5.9 | ||||||||
| T20G5.9.1 | |||||||||
| CE34095 | |||||||||
| Other_name | CELE_T20G5.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | T20G5.9 | ||||||||
| DB_info | Database | AceView | gene | 3L299 | |||||
| WormQTL | gene | WBGene00011871 | |||||||
| WormFlux | gene | WBGene00011871 | |||||||
| NDB | locus_tag | CELE_T20G5.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011871|UniProtKB=Q22615 | |||||||
| family | PTHR22959 | ||||||||
| NCBI | gene | 188661 | |||||||
| RefSeq | protein | NM_066860.3 | |||||||
| TREEFAM | TREEFAM_ID | TF324615 | |||||||
| TrEMBL | UniProtAcc | Q22615 | |||||||
| UniProt_GCRP | UniProtAcc | Q22615 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00075796 | ||||||||
| 00075797 | |||||||||
| 00075798 | |||||||||
| 00075799 | |||||||||
| 00119090 | |||||||||
| Contained_in_operon | CEOP3858 | ||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in exon-exon junction complex disassembly. Predicted to be located in cytoplasm. Predicted to be part of exon-exon junction complex. Is an ortholog of human PYM1 (PYM homolog 1, exon junction complex associated factor). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T20G5.9 | |||||||
| Corresponding_CDS_history | T20G5.9:wp101 | ||||||||
| Corresponding_transcript | T20G5.9.1 | ||||||||
| Other_sequence (22) | |||||||||
| Associated_feature | WBsf993935 | ||||||||
| WBsf225684 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006380 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053668 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035726 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020220 | ||||||||
| Expr1035231 | |||||||||
| Expr1157223 | |||||||||
| Expr2006304 | |||||||||
| Expr2024524 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (97) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Positive | Positive_clone | T20G5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 2.01397 | |||||||
| Reference | WBPaper00028430 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
