WormBase Tree Display for Gene: WBGene00011870
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WBGene00011870 | SMap | S_parent | Sequence | T20G5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele | WBVar01500260 | |||||
WBVar01507462 | ||||||
WBVar01499774 | ||||||
WBVar00101223 | ||||||
WBVar00406864 | ||||||
WBVar00855021 | ||||||
WBVar00855022 | ||||||
WBVar01267532 | ||||||
WBVar01267534 | ||||||
WBVar01498954 | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog | WBGene00142088 | Caenorhabditis brenneri | From_analysis | OMA | ||
WBGene00085206 | Caenorhabditis remanei | From_analysis | OMA | |||
WBGene00085211 | Caenorhabditis remanei | From_analysis | OMA | |||
Inparanoid_8 | ||||||
WormBase-Compara | ||||||
CSP31.g20309 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | |||
FL83_19536 | Caenorhabditis latens | From_analysis | WormBase-Compara | |||
Paralog | WBGene00011869 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||
WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in several structures, including ABalpapppa; ABaraapapaa; pharyngeal cell; rectal epithelial cell; and rectum based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by fourteen chemicals including rotenone; Zidovudine; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | T20G5.8 | ||||
Corresponding_transcript | T20G5.8.1 | |||||
Other_sequence | CSC01049_1 | |||||
FD517327.1 | ||||||
Associated_feature | WBsf645547 | |||||
WBsf225681 | ||||||
Experimental_info | RNAi_result | WBRNAi00053667 | Inferred_automatically | RNAi_primary | ||
WBRNAi00018932 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00035725 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00063171 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00063170 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00006425 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1023745 | |||||
Expr1157222 | ||||||
Expr2006303 | ||||||
Expr2024523 | ||||||
Drives_construct | WBCnstr00030321 | |||||
Construct_product | WBCnstr00030321 | |||||
Microarray_results (19) | ||||||
Expression_cluster (204) | ||||||
Interaction (35) | ||||||
Map_info | Positive | Positive_clone | T20G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | III | 2.00897 | ||||
Reference | WBPaper00041771 | |||||
Method | Gene |