WormBase Tree Display for Gene: WBGene00011841
expand all nodes | collapse all nodes | view schema
WBGene00011841 | SMap | S_parent | Sequence | T19C9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 5R691 | |||||
WormQTL | gene | WBGene00011841 | |||||||
WormFlux | gene | WBGene00011841 | |||||||
NDB | locus_tag | CELE_T19C9.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011841|UniProtKB=O45790 | |||||||
family | PTHR10334 | ||||||||
NCBI | gene | 188600 | |||||||
RefSeq | protein | NM_074963.4 | |||||||
TrEMBL | UniProtAcc | O45790 | |||||||
UniProt_GCRP | UniProtAcc | O45790 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 07 Nov 2007 11:51:23 | WBPerson2970 | Name_change | CGC_name | scl-25 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | scl | ||||||||
Allele (171) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00035230 | ||||||||
Ortholog | chrV_pilon.g17405 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Paralog (31) | |||||||||
Structured_description | Automated_description | Predicted to be located in extracellular space. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T19C9.5 | |||||||
Corresponding_transcript | T19C9.5.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00112660 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018838 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053524 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018835 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035665 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1157094 | ||||||||
Expr2015635 | |||||||||
Expr2033870 | |||||||||
Drives_construct | WBCnstr00030341 | ||||||||
Construct_product | WBCnstr00030341 | ||||||||
Microarray_results (13) | |||||||||
Expression_cluster (101) | |||||||||
Interaction (37) | |||||||||
Map_info | Map | V | Position | 12.8387 | Error | 0.000765 | |||
Positive | Positive_clone | T19C9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |