WormBase Tree Display for Gene: WBGene00011841
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| WBGene00011841 | SMap | S_parent | Sequence | T19C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | scl-25 | Person_evidence | WBPerson261 | |||||
| Sequence_name | T19C9.5 | ||||||||
| Molecular_name | T19C9.5 | ||||||||
| T19C9.5.1 | |||||||||
| CE16422 | |||||||||
| Other_name | CELE_T19C9.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | scl-25 | ||||||||
| DB_info | Database | AceView | gene | 5R691 | |||||
| WormQTL | gene | WBGene00011841 | |||||||
| WormFlux | gene | WBGene00011841 | |||||||
| NDB | locus_tag | CELE_T19C9.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011841|UniProtKB=O45790 | |||||||
| family | PTHR10334 | ||||||||
| NCBI | gene | 188600 | |||||||
| RefSeq | protein | NM_074963.4 | |||||||
| TrEMBL | UniProtAcc | O45790 | |||||||
| UniProt_GCRP | UniProtAcc | O45790 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 Nov 2007 11:51:23 | WBPerson2970 | Name_change | CGC_name | scl-25 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | scl | ||||||||
| Allele (171) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00035230 | ||||||||
| Ortholog | chrV_pilon.g17405 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (31) | |||||||||
| Structured_description | Automated_description | Predicted to be located in extracellular space. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T19C9.5 | |||||||
| Corresponding_transcript | T19C9.5.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00112660 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018838 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053524 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018835 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035665 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1157094 | ||||||||
| Expr2015635 | |||||||||
| Expr2033870 | |||||||||
| Drives_construct | WBCnstr00030341 | ||||||||
| Construct_product | WBCnstr00030341 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (101) | |||||||||
| Interaction | WBInteraction000100991 | ||||||||
| WBInteraction000150001 | |||||||||
| WBInteraction000172489 | |||||||||
| WBInteraction000188212 | |||||||||
| WBInteraction000192737 | |||||||||
| WBInteraction000204874 | |||||||||
| WBInteraction000212493 | |||||||||
| WBInteraction000214067 | |||||||||
| WBInteraction000215052 | |||||||||
| WBInteraction000227711 | |||||||||
| WBInteraction000257310 | |||||||||
| WBInteraction000265421 | |||||||||
| WBInteraction000267500 | |||||||||
| WBInteraction000281021 | |||||||||
| WBInteraction000281560 | |||||||||
| WBInteraction000288848 | |||||||||
| WBInteraction000305657 | |||||||||
| WBInteraction000307137 | |||||||||
| WBInteraction000315558 | |||||||||
| WBInteraction000321263 | |||||||||
| WBInteraction000337055 | |||||||||
| WBInteraction000340305 | |||||||||
| WBInteraction000352999 | |||||||||
| WBInteraction000365206 | |||||||||
| WBInteraction000365509 | |||||||||
| WBInteraction000373945 | |||||||||
| WBInteraction000376523 | |||||||||
| WBInteraction000389552 | |||||||||
| WBInteraction000400152 | |||||||||
| WBInteraction000412465 | |||||||||
| WBInteraction000416140 | |||||||||
| WBInteraction000425641 | |||||||||
| WBInteraction000436157 | |||||||||
| WBInteraction000438137 | |||||||||
| WBInteraction000440269 | |||||||||
| WBInteraction000443875 | |||||||||
| WBInteraction000457057 | |||||||||
| Map_info | Map | V | Position | 12.8387 | Error | 0.000765 | |||
| Positive | Positive_clone | T19C9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
