WormBase Tree Display for Gene: WBGene00011835
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| WBGene00011835 | SMap | S_parent | Sequence | T19B10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pgap-1 | |||||||
| Sequence_name | T19B10.8 | ||||||||
| Molecular_name | T19B10.8 | ||||||||
| T19B10.8.1 | |||||||||
| CE45494 | |||||||||
| Other_name | CELE_T19B10.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | pgap-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 Dec 2018 16:50:34 | WBPerson1983 | Name_change | CGC_name | pgap-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pgap | ||||||||
| Allele (43) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOP5280 | ||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Predicted to enable phosphatidylinositol deacylase activity. Predicted to be involved in GPI anchor metabolic process and endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to be located in endoplasmic reticulum. Is an ortholog of human PGAP1 (post-GPI attachment to proteins inositol deacylase 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T19B10.8 | |||||||
| Corresponding_CDS_history | T19B10.8:wp220 | ||||||||
| Corresponding_transcript | T19B10.8.1 | ||||||||
| Other_sequence | CBC06477_1 | ||||||||
| Oden_isotig25919 | |||||||||
| Associated_feature | WBsf647242 | ||||||||
| WBsf977289 | |||||||||
| WBsf977290 | |||||||||
| WBsf977291 | |||||||||
| WBsf232484 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00007670 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053497 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111240 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000823 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035650 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018821 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017180 | ||||||||
| Expr1035217 | |||||||||
| Expr1157063 | |||||||||
| Expr2006242 | |||||||||
| Expr2024460 | |||||||||
| Drives_construct | WBCnstr00030347 | ||||||||
| Construct_product | WBCnstr00030347 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (144) | |||||||||
| Interaction (124) | |||||||||
| Map_info | Map | V | Position | 3.00411 | |||||
| Positive | Positive_clone | T19B10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
