WormBase Tree Display for Gene: WBGene00011835
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WBGene00011835 | SMap | S_parent | Sequence | T19B10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | pgap-1 | |||||||
Sequence_name | T19B10.8 | ||||||||
Molecular_name | T19B10.8 | ||||||||
T19B10.8.1 | |||||||||
CE45494 | |||||||||
Other_name | CELE_T19B10.8 | Accession_evidence | NDB | BX284605 | |||||
Public_name | pgap-1 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 11 Dec 2018 16:50:34 | WBPerson1983 | Name_change | CGC_name | pgap-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pgap | ||||||||
Allele (43) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Contained_in_operon | CEOP5280 | ||||||||
Ortholog (37) | |||||||||
Structured_description | Automated_description | Predicted to enable phosphatidylinositol deacylase activity. Predicted to be involved in GPI anchor metabolic process and endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to be located in endoplasmic reticulum. Is an ortholog of human PGAP1 (post-GPI attachment to proteins inositol deacylase 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T19B10.8 | |||||||
Corresponding_CDS_history | T19B10.8:wp220 | ||||||||
Corresponding_transcript | T19B10.8.1 | ||||||||
Other_sequence | CBC06477_1 | ||||||||
Oden_isotig25919 | |||||||||
Associated_feature | WBsf647242 | ||||||||
WBsf977289 | |||||||||
WBsf977290 | |||||||||
WBsf977291 | |||||||||
WBsf232484 | |||||||||
Experimental_info | RNAi_result | WBRNAi00007670 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00053497 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00111240 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000823 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035650 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018821 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1017180 | ||||||||
Expr1035217 | |||||||||
Expr1157063 | |||||||||
Expr2006242 | |||||||||
Expr2024460 | |||||||||
Drives_construct | WBCnstr00030347 | ||||||||
Construct_product | WBCnstr00030347 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (144) | |||||||||
Interaction (124) | |||||||||
Map_info | Map | V | Position | 3.00411 | |||||
Positive | Positive_clone | T19B10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |