WormBase Tree Display for Gene: WBGene00011817
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WBGene00011817 | SMap | S_parent | Sequence | CHROMOSOME_III | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (39) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (20) | ||||||
Paralog | WBGene00004124 | Caenorhabditis elegans | From_analysis | Panther | ||
WBGene00009099 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00009561 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00044582 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00219375 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00022386 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in excretory cell; intestine; neuronal sheath cell; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by six chemicals including rotenone; antimycin; and Cadmium Chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Cystine-knot cytokine. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | T16H12.9 | ||||
Corresponding_CDS_history | T16H12.9:wp59 | |||||
T16H12.9:wp179 | ||||||
Corresponding_transcript | T16H12.9.1 | |||||
Other_sequence | JI172934.1 | |||||
Tcol_isotig13736 | ||||||
Oden_isotig29624 | ||||||
Acan_isotig00331 | ||||||
PPC13733_1 | ||||||
Associated_feature | WBsf659472 | |||||
WBsf225661 | ||||||
Experimental_info | RNAi_result | WBRNAi00070887 | Inferred_automatically | RNAi_primary | ||
WBRNAi00097727 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00053440 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00097728 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00070886 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00018787 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00006407 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00021826 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00097731 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00099093 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1018641 | |||||
Expr1157012 | ||||||
Expr2006226 | ||||||
Expr2024444 | ||||||
Drives_construct | WBCnstr00030361 | |||||
Construct_product | WBCnstr00030361 | |||||
Microarray_results (17) | ||||||
Expression_cluster (144) | ||||||
Interaction (24) | ||||||
Map_info | Positive | Positive_clone | T16H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | III | 1.83204 | ||||
Reference | WBPaper00025094 | |||||
WBPaper00034745 | ||||||
Method | Gene |