WormBase Tree Display for Gene: WBGene00011817
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| WBGene00011817 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T16H12.9 | |||||||
| Molecular_name | T16H12.9 | ||||||||
| T16H12.9.1 | |||||||||
| CE41453 | |||||||||
| Other_name | CELE_T16H12.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | T16H12.9 | ||||||||
| DB_info | Database | AceView | gene | 3L199 | |||||
| WormQTL | gene | WBGene00011817 | |||||||
| WormFlux | gene | WBGene00011817 | |||||||
| NDB | locus_tag | CELE_T16H12.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011817|UniProtKB=P34572 | |||||||
| family | PTHR33995 | ||||||||
| NCBI | gene | 188562 | |||||||
| RefSeq | protein | NM_066843.4 | |||||||
| SwissProt | UniProtAcc | P34572 | |||||||
| TREEFAM | TREEFAM_ID | TF316826 | |||||||
| UniProt_GCRP | UniProtAcc | P34572 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01500260 | ||||||||
| WBVar01918691 | |||||||||
| WBVar00237105 | |||||||||
| WBVar01332460 | |||||||||
| WBVar01332462 | |||||||||
| WBVar01904074 | |||||||||
| WBVar01904075 | |||||||||
| WBVar00216295 | |||||||||
| WBVar01409191 | |||||||||
| WBVar01409192 | |||||||||
| WBVar00250318 | |||||||||
| WBVar01499774 | |||||||||
| WBVar00406663 | |||||||||
| WBVar00406664 | |||||||||
| WBVar00406665 | |||||||||
| WBVar00406666 | |||||||||
| WBVar00406667 | |||||||||
| WBVar00406668 | |||||||||
| WBVar01267450 | |||||||||
| WBVar00178385 | |||||||||
| WBVar01267452 | |||||||||
| WBVar00854467 | |||||||||
| WBVar00854468 | |||||||||
| WBVar00854469 | |||||||||
| WBVar00854470 | |||||||||
| WBVar00854471 | |||||||||
| WBVar00854472 | |||||||||
| WBVar00854473 | |||||||||
| WBVar00854474 | |||||||||
| WBVar00854475 | |||||||||
| WBVar00854476 | |||||||||
| WBVar00854477 | |||||||||
| WBVar00854478 | |||||||||
| WBVar00266405 | |||||||||
| WBVar00854479 | |||||||||
| WBVar00854480 | |||||||||
| WBVar01499666 | |||||||||
| WBVar01499667 | |||||||||
| WBVar01498954 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00004124 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00009099 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00009561 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044582 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00219375 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00022386 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in excretory cell; intestine; neuronal sheath cell; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by six chemicals including rotenone; antimycin; and Cadmium Chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Cystine-knot cytokine. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T16H12.9 | |||||||
| Corresponding_CDS_history | T16H12.9:wp59 | ||||||||
| T16H12.9:wp179 | |||||||||
| Corresponding_transcript | T16H12.9.1 | ||||||||
| Other_sequence | JI172934.1 | ||||||||
| Tcol_isotig13736 | |||||||||
| Oden_isotig29624 | |||||||||
| Acan_isotig00331 | |||||||||
| PPC13733_1 | |||||||||
| Associated_feature | WBsf659472 | ||||||||
| WBsf225661 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00070887 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00097727 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053440 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097728 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070886 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018787 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006407 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021826 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097731 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00099093 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018641 | ||||||||
| Expr1157012 | |||||||||
| Expr2006226 | |||||||||
| Expr2024444 | |||||||||
| Drives_construct | WBCnstr00030361 | ||||||||
| Construct_product | WBCnstr00030361 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (144) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Positive | Positive_clone | T16H12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 1.83204 | |||||||
| Reference | WBPaper00025094 | ||||||||
| WBPaper00034745 | |||||||||
| Method | Gene |
