WormBase Tree Display for Gene: WBGene00011767
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| WBGene00011767 | SMap | S_parent | Sequence | T14D7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | agxt-1 | Person_evidence | WBPerson17942 | |||||
| Sequence_name | T14D7.1 | ||||||||
| Molecular_name | T14D7.1 | ||||||||
| T14D7.1.1 | |||||||||
| CE23985 | |||||||||
| T14D7.1.2 | |||||||||
| Other_name | CELE_T14D7.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | agxt-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Sep 2015 11:19:37 | WBPerson2970 | Name_change | CGC_name | agxt-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | agxt | ||||||||
| Allele (50) | |||||||||
| Strain | WBStrain00003009 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00086956 | ||||||||
| 00086957 | |||||||||
| 00086958 | |||||||||
| 00086959 | |||||||||
| 00086960 | |||||||||
| 00086961 | |||||||||
| 00086962 | |||||||||
| 00086963 | |||||||||
| 00086964 | |||||||||
| 00086965 | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00009177 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | T14D7.1 is orthologous to the human gene ALANINE-GLYOXYLATE AMINOTRANSFERASE HOMOLOG (AGXT; OMIM:604285), which when mutated leads to disease. | Paper_evidence | WBPaper00004637 | |||||
| Curator_confirmed | WBPerson1823 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables alanine-glyoxylate transaminase activity. Involved in glycine biosynthetic process, by transamination of glyoxylate. Located in mitochondrion. Human ortholog(s) of this gene implicated in primary hyperoxaluria type 1. Is an ortholog of human AGXT (alanine--glyoxylate aminotransferase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111670 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:341) | ||||
| Molecular_info | Corresponding_CDS | T14D7.1 | |||||||
| Corresponding_transcript | T14D7.1.1 | ||||||||
| T14D7.1.2 | |||||||||
| Other_sequence (102) | |||||||||
| Associated_feature | WBsf658006 | ||||||||
| WBsf658007 | |||||||||
| WBsf658008 | |||||||||
| WBsf658009 | |||||||||
| WBsf988838 | |||||||||
| WBsf221823 | |||||||||
| WBsf221824 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053319 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035565 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018708 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram797 | ||||||||
| Expr6693 | |||||||||
| Expr15739 | |||||||||
| Expr1015563 | |||||||||
| Expr1035181 | |||||||||
| Expr1156904 | |||||||||
| Expr2009267 | |||||||||
| Expr2027504 | |||||||||
| Drives_construct | WBCnstr00003509 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (131) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Map | II | Position | 0.905429 | |||||
| Positive | Positive_clone | T14D7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00049683 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
