WormBase Tree Display for Gene: WBGene00011676
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WBGene00011676 | SMap | S_parent | Sequence | T10B9 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | cyp-13A2 | |||||
Sequence_name | T10B9.7 | ||||||
Molecular_name | T10B9.7 | ||||||
T10B9.7.1 | |||||||
CE01659 | |||||||
Other_name | CELE_T10B9.7 | Accession_evidence | NDB | BX284602 | |||
Public_name | cyp-13A2 | ||||||
DB_info | Database (13) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cyp | ||||||
Allele (68) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00079959 | ||||||
00079960 | |||||||
00079961 | |||||||
00118915 | |||||||
00118916 | |||||||
00118917 | |||||||
00118918 | |||||||
Contained_in_operon | CEOP2766 | ||||||
Ortholog (80) | |||||||
Paralog (12) | |||||||
Structured_description | Concise_description | cyp-13A2 encodes one of ~80 C. elegans cytochrome P450s: membrane-associated, heme-containing NADPH-dependent monooxygenases that catalyze the oxidative metabolism of a variety of exogenous compounds and endogenous substrates. | Curator_confirmed | WBPerson1843 | |||
Date_last_updated | 20 Nov 2008 00:00:00 | ||||||
Automated_description | Predicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity. Human ortholog(s) of this gene implicated in several diseases, including Ghosal hematodiaphyseal syndrome; familial Mediterranean fever; and leukemia (multiple). Is an ortholog of several human genes including CYP3A4 (cytochrome P450 family 3 subfamily A member 4); CYP3A5 (cytochrome P450 family 3 subfamily A member 5); and CYP3A7 (cytochrome P450 family 3 subfamily A member 7). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:8552 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2638) | ||
DOID:3526 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11609) | ||||
DOID:2987 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2637) | ||||
DOID:9952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2638) | ||||
DOID:0112251 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11609) | ||||
DOID:0080630 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2638) | ||||
DOID:10825 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2638) | ||||
DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2637) | ||||
Molecular_info | Corresponding_CDS | T10B9.7 | |||||
Corresponding_transcript | T10B9.7.1 | ||||||
Other_sequence (11) | |||||||
Associated_feature | WBsf650458 | ||||||
WBsf650459 | |||||||
WBsf989147 | |||||||
WBsf989148 | |||||||
WBsf1012903 | |||||||
WBsf1012904 | |||||||
Experimental_info | RNAi_result (4) | ||||||
Expr_pattern | Expr1025189 | ||||||
Expr1156620 | |||||||
Expr2010682 | |||||||
Expr2028922 | |||||||
Drives_construct | WBCnstr00030477 | ||||||
Construct_product | WBCnstr00030477 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (232) | |||||||
Interaction (28) | |||||||
Map_info | Map | II | Position | 1.71406 | Error | 0.000287 | |
Positive | Positive_clone | T10B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00026952 | ||||||
WBPaper00038491 | |||||||
WBPaper00042257 | |||||||
WBPaper00055090 | |||||||
WBPaper00064598 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |