WormBase Tree Display for Gene: WBGene00011648

WBGene00011648 SMap: S_parent: Sequence: T09E8
  Identity: Version: 3
    Name: CGC_name: cni-1 Paper_evidence: WBPaper00040563
            WBPaper00044271
          Person_evidence: WBPerson531
      Sequence_name: T09E8.3
      Molecular_name: T09E8.3
        T09E8.3.1
        CE23961
      Other_name: cnih-2 Person_evidence: WBPerson260
        CELE_T09E8.3 Accession_evidence: NDB BX284605
      Public_name: cni-1
    DB_info: Database: AceView gene 5N661
        WormQTL gene WBGene00011648
        WormFlux gene WBGene00011648
        NDB locus_tag CELE_T09E8.3
        Panther gene CAEEL|WormBase=WBGene00011648|UniProtKB=Q22361
          family PTHR12290
        NCBI gene 179801
        RefSeq protein NM_073877.7
        SwissProt UniProtAcc Q22361
        TREEFAM TREEFAM_ID TF300083
        UniProt_GCRP UniProtAcc Q22361
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 18 Mar 2011 16:24:52 WBPerson2960 Name_change: CGC_name: cnih-2
        3 21 May 2013 15:46:06 WBPerson2970 Name_change: CGC_name: cni-1
                Other_name: cnih-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cni
    Allele (23)
    RNASeq_FPKM (74)
    GO_annotation (25)
    Contained_in_operon: CEOP5384
    Ortholog (44)
    Paralog: WBGene00022171 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enables signaling receptor binding activity. Involved in negative regulation of anterograde synaptic vesicle transport; negative regulation of receptor localization to synapse; and positive regulation of ERAD pathway. Located in several cellular components, including Golgi apparatus; perinuclear endoplasmic reticulum; and somatodendritic compartment. Expressed in AVAL; AVAR; and nervous system. Is an ortholog of human CNIH1 (cornichon family AMPA receptor auxiliary protein 1) and CNIH2 (cornichon family AMPA receptor auxiliary protein 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T09E8.3
    Corresponding_transcript: T09E8.3.1
    Other_sequence (21)
    Associated_feature: WBsf662005
      WBsf232747
  Experimental_info: RNAi_result: WBRNAi00076667 Inferred_automatically: RNAi_primary
      WBRNAi00018501 Inferred_automatically: RNAi_primary
      WBRNAi00052964 Inferred_automatically: RNAi_primary
      WBRNAi00090922 Inferred_automatically: RNAi_primary
      WBRNAi00035395 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11272
      Expr1025074
      Expr1035132
      Expr1156567
      Expr2010275
      Expr2028517
    Drives_construct: WBCnstr00018402
      WBCnstr00018403
      WBCnstr00030501
    Construct_product (15)
    Microarray_results (20)
    Expression_cluster (81)
    Interaction (25)
  Map_info: Map: V Position: 4.97082 Error: 0.001866
    Positive: Positive_clone: T09E8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00044271
    WBPaper00055090
    WBPaper00057839
    WBPaper00061547
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene