WormBase Tree Display for Gene: WBGene00011647

WBGene00011647 SMap: S_parent: Sequence: CHROMOSOME_V
  Identity: Version: 3
    Name: CGC_name: noca-1 Person_evidence: WBPerson1816
      Sequence_name: T09E8.1
      Molecular_name (27)
      Other_name: CELE_T09E8.1 Accession_evidence: NDB BX284605
      Public_name: noca-1
    DB_info: Database: AceView gene 5N655
        WormQTL gene WBGene00011647
        WormFlux gene WBGene00011647
        NDB locus_tag CELE_T09E8.1
        NCBI gene 3565610
        RefSeq protein NM_182401.5
            NM_073875.5
            NM_073874.7
            NM_182400.7
            NM_001047700.5
            NM_001383436.1
            NM_182399.8
            NM_073873.3
            NM_001316777.4
        SwissProt UniProtAcc G5EEK3
        TREEFAM TREEFAM_ID TF316130
        UniProt_GCRP UniProtAcc G5EEK3
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 05 May 2011 12:15:34 WBPerson2970 Name_change: CGC_name: noca-1
        3 09 Sep 2015 15:37:50 WBPerson4025 Event: Acquires_merge: WBGene00010549
      Acquires_merge: WBGene00010549
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: noca
    Allele (445)
    Strain: WBStrain00037614
    RNASeq_FPKM (74)
    GO_annotation (14)
    Ortholog: WBGene00031010 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00058970 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00164002 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00125711 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00191743 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00058973 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00121088 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00193841 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
      WBGene00228664 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2217 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2082 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18405 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15772 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g14238 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g17951 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1856 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g1748 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g19102 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1951 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Cnig_chr_V.g19632 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold461.g1496 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01371.g20436 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12072 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017714 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50272410 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g16184 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00242749 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00103463 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Involved in cytoplasmic microtubule organization; germ cell development; and nematode larval development. Located in microtubule. Expressed in hyp7 syncytium and intestinal cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T09E8.1a
      T09E8.1b
      T09E8.1c
      T09E8.1d
      T09E8.1e
      T09E8.1f
      T09E8.1g
      T09E8.1h
      T09E8.1i
    Corresponding_CDS_history: T09E8.1a:wp87
      T09E8.1b:wp87
      T09E8.1c:wp179
      T09E8.1e:wp230
    Corresponding_transcript: T09E8.1a.1
      T09E8.1b.1
      T09E8.1c.1
      T09E8.1d.1
      T09E8.1e.1
      T09E8.1f.1
      T09E8.1g.1
      T09E8.1h.1
      T09E8.1i.1
    Other_sequence (20)
    Associated_feature (62)
  Experimental_info: RNAi_result (15)
    Expr_pattern (11)
    Drives_construct (19)
    Construct_product (24)
    Antibody: WBAntibody00002654
    Microarray_results (74)
    Expression_cluster (199)
    SAGE_tag: SAGE:ttttggaaaa Strand: Antisense
      SAGE:agctttctta Strand: Antisense
      SAGE:cacaaaaaagataaaaa Strand: Sense
        Unambiguously_mapped
    Interaction (13)
  Map_info: Map: V Position: 4.96091 Error: 0.002678
    Positive: Positive_clone: T09E8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00042775
    WBPaper00047357
    WBPaper00047481
    WBPaper00048540
    WBPaper00048849
    WBPaper00060754
    WBPaper00064679
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene