WormBase Tree Display for Gene: WBGene00011647

WBGene00011647 SMap: S_parent: Sequence: CHROMOSOME_V
  Identity: Version: 3
    Name: CGC_name: noca-1 Person_evidence: WBPerson1816
      Sequence_name: T09E8.1
      Molecular_name (27)
      Other_name: CELE_T09E8.1 Accession_evidence: NDB BX284605
      Public_name: noca-1
    DB_info: Database: AceView gene 5N655
        WormQTL gene WBGene00011647
        WormFlux gene WBGene00011647
        NDB locus_tag CELE_T09E8.1
        NCBI gene 3565610
        RefSeq protein NM_182401.5
            NM_073875.5
            NM_073874.7
            NM_182400.7
            NM_001047700.5
            NM_001383436.1
            NM_182399.8
            NM_073873.3
            NM_001316777.4
        SwissProt UniProtAcc G5EEK3
        TREEFAM TREEFAM_ID TF316130
        UniProt_GCRP UniProtAcc G5EEK3
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 05 May 2011 12:15:34 WBPerson2970 Name_change: CGC_name: noca-1
        3 09 Sep 2015 15:37:50 WBPerson4025 Event: Acquires_merge: WBGene00010549
      Acquires_merge: WBGene00010549
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: noca
    Allele (445)
    Strain: WBStrain00037614
    RNASeq_FPKM (74)
    GO_annotation (14)
    Ortholog (28)
    Structured_description: Automated_description: Involved in cytoplasmic microtubule organization; germ cell development; and nematode larval development. Located in microtubule. Expressed in hyp7 syncytium and intestinal cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T09E8.1a
      T09E8.1b
      T09E8.1c
      T09E8.1d
      T09E8.1e
      T09E8.1f
      T09E8.1g
      T09E8.1h
      T09E8.1i
    Corresponding_CDS_history: T09E8.1a:wp87
      T09E8.1b:wp87
      T09E8.1c:wp179
      T09E8.1e:wp230
    Corresponding_transcript: T09E8.1a.1
      T09E8.1b.1
      T09E8.1c.1
      T09E8.1d.1
      T09E8.1e.1
      T09E8.1f.1
      T09E8.1g.1
      T09E8.1h.1
      T09E8.1i.1
    Other_sequence (20)
    Associated_feature: WBsf647441
      WBsf647442
      WBsf647443
      WBsf647444
      WBsf647445
      WBsf661975
      WBsf661976
      WBsf661977
      WBsf661978
      WBsf661979
      WBsf661980
      WBsf661981
      WBsf661982
      WBsf661983
      WBsf661984
      WBsf661985
      WBsf661986
      WBsf661987
      WBsf661988
      WBsf661989
      WBsf661990
      WBsf661991
      WBsf661992
      WBsf661993
      WBsf661994
      WBsf661995
      WBsf661996
      WBsf661997
      WBsf661998
      WBsf661999
      WBsf662000
      WBsf662001
      WBsf662002
      WBsf662003
      WBsf1001732
      WBsf1001733
      WBsf1001734
      WBsf1001735
      WBsf1001736
      WBsf1001737
      WBsf1001738
      WBsf1001739
      WBsf1001740
      WBsf1001741
      WBsf1001742
      WBsf1001743
      WBsf1001744
      WBsf1001745
      WBsf1001746
      WBsf1001747
      WBsf1001748
      WBsf1020665
      WBsf1020666
      WBsf1020667
      WBsf1020668
      WBsf1020669
      WBsf1020670
      WBsf1020671
      WBsf1020672
      WBsf1020673
      WBsf1020674
      WBsf232745
  Experimental_info: RNAi_result (15)
    Expr_pattern (11)
    Drives_construct (19)
    Construct_product (24)
    Antibody: WBAntibody00002654
    Microarray_results: SMD_K03H4.2
      SMD_T09E8.1
      178333_at
      183789_s_at
      A_12_P106341
      A_12_P110222
      A_12_P116720
      A_12_P175759
      A_12_P175760
      Aff_K03H4.2
      Aff_T09E8.1
      GPL13394_WBGene00010549
      GPL13394_WBGene00011647
      GPL13914_K03H4.2
      GPL13914_T09E8.1
      GPL14144_K03H4.2_234-293_0.909_12_C
      GPL14144_K03H4.2_348-407_0.935_3_A
      GPL14144_K03H4.2_599-658_0.920_8_B
      GPL14144_T09E8.1c_2172-2231_0.885_39_A
      GPL14144_T09E8.1c_2424-2483_0.946_6_C
      GPL14144_T09E8.1c_2725-2784_0.966_1_B
      GPL19516_CGZ0027668
      GPL19516_CGZ0034415
      GPL19516_CGZ0034416
      GPL19516_CGZ0034417
      GPL19516_CGZ0034418
      GPL19516_CGZ0034419
      GPL19516_CGZ0034420
      GPL19516_CGZ0034421
      GPL21109_K03H4.2
      GPL21109_T09E8.1a
      GPL3518_CE11698
      GPL3518_CE31991
      GPL8304_CE_WBGene00010549_A
      GPL8304_CE_WBGene00011647_A
      GPL8304_CE_WBGene00011647_B
      GPL8304_CE_WBGene00011647_C
      GPL8673_K03H4_2P00124
      GPL8673_K03H4_2P00460
      GPL8673_K03H4_2P00674
      GPL8673_T09E8_1aP00972
      GPL8673_T09E8_1aP01725
      GPL8673_T09E8_1aP02130
      GPL8673_T09E8_1bP00798
      GPL8673_T09E8_1bP01551
      GPL8673_T09E8_1bP01956
      GPL8673_T09E8_1cP01044
      GPL8673_T09E8_1cP01797
      GPL8673_T09E8_1cP02202
      GPL8673_T09E8_1dP00151
      GPL8673_T09E8_1dP00160
      GPL8673_T09E8_1dP00170
      GPL8673_T09E8_1eP00252
      GPL8673_T09E8_1eP01005
      GPL8673_T09E8_1eP01410
      GPL8673_T09E8_1fP00804
      GPL8673_T09E8_1fP01557
      GPL8673_T09E8_1fP01962
      GPL9450_K03H4.2
      GPL9450_T09E8.1a
      GPL9450_T09E8.1b
      GPL9450_T09E8.1c
      GPL9450_T09E8.1d
      GPL9450_T09E8.1e
      cea2.3.23467
      cea2.3.23521
      cea2.d.05525
      cea2.d.05528
      cea2.d.07982
      cea2.d.38271
      cea2.d.38276
      cea2.d.38300
      cea2.d.38329
      cea2.d.38330
    Expression_cluster (199)
    SAGE_tag: SAGE:ttttggaaaa Strand: Antisense
      SAGE:agctttctta Strand: Antisense
      SAGE:cacaaaaaagataaaaa Strand: Sense
        Unambiguously_mapped
    Interaction (13)
  Map_info: Map: V Position: 4.96091 Error: 0.002678
    Positive: Positive_clone: T09E8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00042775
    WBPaper00047357
    WBPaper00047481
    WBPaper00048540
    WBPaper00048849
    WBPaper00060754
    WBPaper00064679
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene