WormBase Tree Display for Gene: WBGene00011638
expand all nodes | collapse all nodes | view schema
| WBGene00011638 | SMap | S_parent | Sequence | T09A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ostb-1 | Person_evidence | WBPerson8 | |||||
| Sequence_name | T09A5.11 | ||||||||
| Molecular_name | T09A5.11 | ||||||||
| T09A5.11.1 | |||||||||
| CE01081 | |||||||||
| Other_name | CELE_T09A5.11 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | ostb-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Sep 2009 14:42:50 | WBPerson9133 | Name_change | CGC_name | ostb-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ostb | ||||||||
| Allele (33) | |||||||||
| Strain | WBStrain00055469 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00046223 | ||||||||
| 00046224 | |||||||||
| 00046225 | |||||||||
| 00046226 | |||||||||
| 00046227 | |||||||||
| 00046228 | |||||||||
| 00105785 | |||||||||
| 00118858 | |||||||||
| 00118859 | |||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Involved in IRE1-mediated unfolded protein response. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of oligosaccharyltransferase complex. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ir. Is an ortholog of human DDOST (dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080569 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2728) | ||||
| Molecular_info | Corresponding_CDS | T09A5.11 | |||||||
| Corresponding_transcript | T09A5.11.1 | ||||||||
| Other_sequence (71) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr1017386 | ||||||||
| Expr1035126 | |||||||||
| Expr1156518 | |||||||||
| Expr2014654 | |||||||||
| Expr2032887 | |||||||||
| Drives_construct | WBCnstr00030510 | ||||||||
| Construct_product | WBCnstr00030510 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction (100) | |||||||||
| Map_info | Map | II | Position | 0.589813 | Error | 0.001296 | |||
| Positive | Positive_clone | T09A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029024 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00045573 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059347 | |||||||||
| WBPaper00060970 | |||||||||
| WBPaper00064933 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
