WormBase Tree Display for Gene: WBGene00011503
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| WBGene00011503 | SMap | S_parent | Sequence | T05G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gcc-2 | Paper_evidence | WBPaper00046586 | |||||
| Person_evidence | WBPerson298 | ||||||||
| Sequence_name | T05G5.9 | ||||||||
| Molecular_name | T05G5.9a | ||||||||
| T05G5.9a.1 | |||||||||
| CE34088 | |||||||||
| T05G5.9b | |||||||||
| CE34089 | |||||||||
| T05G5.9b.1 | |||||||||
| Other_name | CELE_T05G5.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | gcc-2 | ||||||||
| DB_info | Database | AceView | gene | 3K848 | |||||
| WormQTL | gene | WBGene00011503 | |||||||
| WormFlux | gene | WBGene00011503 | |||||||
| NDB | locus_tag | CELE_T05G5.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011503|UniProtKB=P34562 | |||||||
| family | PTHR23157 | ||||||||
| NCBI | gene | 176378 | |||||||
| RefSeq | protein | NM_001027578.5 | |||||||
| NM_001027577.4 | |||||||||
| SwissProt | UniProtAcc | P34562 | |||||||
| TREEFAM | TREEFAM_ID | TF320667 | |||||||
| UniProt_GCRP | UniProtAcc | P34562 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 25 Mar 2015 16:36:59 | WBPerson2970 | Name_change | CGC_name | gcc-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gcc | ||||||||
| Allele (54) | |||||||||
| Strain | WBStrain00008484 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00043232 | ||||||||
| Contained_in_operon | CEOP3616 | ||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00002220 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Predicted to be located in Golgi apparatus. Is an ortholog of human GCC2 (GRIP and coiled-coil domain containing 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05G5.9a | |||||||
| T05G5.9b | |||||||||
| Corresponding_CDS_history | T05G5.9:wp100 | ||||||||
| T05G5.9:wp101 | |||||||||
| Corresponding_transcript | T05G5.9a.1 | ||||||||
| T05G5.9b.1 | |||||||||
| Other_sequence | CBC10174_1 | ||||||||
| CBC01309_1 | |||||||||
| CBC07543_1 | |||||||||
| Associated_feature | WBsf651403 | ||||||||
| WBsf667327 | |||||||||
| WBsf978986 | |||||||||
| WBsf993792 | |||||||||
| WBsf993793 | |||||||||
| WBsf227365 | |||||||||
| WBsf227366 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018250 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006084 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018249 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052571 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012861 | ||||||||
| Expr1035066 | |||||||||
| Expr1156187 | |||||||||
| Expr2011961 | |||||||||
| Expr2030198 | |||||||||
| Drives_construct | WBCnstr00030605 | ||||||||
| Construct_product | WBCnstr00030605 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (106) | |||||||||
| Interaction | WBInteraction000218608 | ||||||||
| WBInteraction000383674 | |||||||||
| WBInteraction000420116 | |||||||||
| WBInteraction000433175 | |||||||||
| WBInteraction000465875 | |||||||||
| WBInteraction000543833 | |||||||||
| WBInteraction000544022 | |||||||||
| WBInteraction000576296 | |||||||||
| Map_info | Map | III | Position | 0.992631 | |||||
| Positive | Positive_clone | T05G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038455 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00046586 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
