WormBase Tree Display for Gene: WBGene00011469
expand all nodes | collapse all nodes | view schema
WBGene00011469 | SMap | S_parent | Sequence | T05C12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | dylt-3 | Person_evidence | WBPerson3088 | |||
Sequence_name | T05C12.5 | ||||||
Molecular_name | T05C12.5 | ||||||
T05C12.5.1 | |||||||
CE51565 | |||||||
T05C12.5.2 | |||||||
Other_name | CELE_T05C12.5 | Accession_evidence | NDB | BX284602 | |||
Public_name | dylt-3 | ||||||
DB_info | Database | AceView | gene | 2I467 | |||
WormQTL | gene | WBGene00011469 | |||||
WormFlux | gene | WBGene00011469 | |||||
NDB | locus_tag | CELE_T05C12.5 | |||||
Panther | gene | CAEEL|WormBase=WBGene00011469|UniProtKB=Q22226 | |||||
family | PTHR21255 | ||||||
NCBI | gene | 188123 | |||||
RefSeq | protein | NM_001330954.3 | |||||
TrEMBL | UniProtAcc | Q22226 | |||||
UniProt_GCRP | UniProtAcc | Q22226 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | dylt | ||||||
Allele (15) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00074538 | ||||||
00074539 | |||||||
00074540 | |||||||
00074541 | |||||||
Ortholog (15) | |||||||
Paralog | WBGene00008764 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00017014 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Concise_description | dylt-3 encodes a putative dynein light chain subunit paralogous to DYLT-3, and orthologous to human DYNLT1 and DYNLT3 (OMIM: 300302); unlike its paralog DYLT-1, DYLT-3 does not obviously inhibit DHC-1 in vivo. | Paper_evidence | WBPaper00030897 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 26 Aug 2007 00:00:00 | ||||||
Automated_description | Predicted to enable dynein intermediate chain binding activity. Predicted to be involved in microtubule-based movement. Predicted to be located in cytoplasm. Predicted to be part of cytoplasmic dynein complex. Expressed in ciliated neurons and pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T05C12.5 | |||||
Corresponding_CDS_history | T05C12.5:wp253 | ||||||
Corresponding_transcript | T05C12.5.1 | ||||||
T05C12.5.2 | |||||||
Associated_feature | WBsf644447 | ||||||
WBsf654900 | |||||||
WBsf988666 | |||||||
Experimental_info | RNAi_result | WBRNAi00077091 | Inferred_automatically | RNAi_primary | |||
WBRNAi00077092 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022436 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00052492 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr9591 | ||||||
Expr12317 | |||||||
Expr1014137 | |||||||
Expr1156118 | |||||||
Expr2011141 | |||||||
Expr2029377 | |||||||
Drives_construct | WBCnstr00014155 | ||||||
WBCnstr00020992 | |||||||
WBCnstr00030630 | |||||||
Construct_product | WBCnstr00020992 | ||||||
WBCnstr00030630 | |||||||
Microarray_results (16) | |||||||
Expression_cluster (91) | |||||||
Map_info | Map | II | Position | 0.745964 | Error | 0.001412 | |
Positive | Positive_clone | T05C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5546 | |||||
4965 | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00029395 | ||||||
WBPaper00038491 | |||||||
WBPaper00063946 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |