WormBase Tree Display for Gene: WBGene00011418
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| WBGene00011418 | SMap | S_parent | Sequence | T04A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | igdb-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | T04A11.3 | ||||||||
| Molecular_name | T04A11.3 | ||||||||
| T04A11.3.1 | |||||||||
| CE42641 | |||||||||
| Other_name | CELE_T04A11.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | igdb-1 | ||||||||
| DB_info | Database | AceView | gene | 4N247 | |||||
| WormQTL | gene | WBGene00011418 | |||||||
| WormFlux | gene | WBGene00011418 | |||||||
| NDB | locus_tag | CELE_T04A11.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011418|UniProtKB=O18016 | |||||||
| family | PTHR13817 | ||||||||
| NCBI | gene | 3565301 | |||||||
| RefSeq | protein | NM_069986.2 | |||||||
| SwissProt | UniProtAcc | O18016 | |||||||
| TREEFAM | TREEFAM_ID | TF315410 | |||||||
| UniProt_GCRP | UniProtAcc | O18016 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Mar 2012 16:42:47 | WBPerson2970 | Name_change | CGC_name | igdb-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | igdb | ||||||||
| Allele (20) | |||||||||
| Strain | WBStrain00047635 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00031256 | ||||||||
| 00031257 | |||||||||
| 00031258 | |||||||||
| Ortholog (36) | |||||||||
| Paralog (25) | |||||||||
| Structured_description | Automated_description | Predicted to be located in plasma membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T04A11.3 | |||||||
| Corresponding_CDS_history | T04A11.3:wp191 | ||||||||
| Corresponding_transcript | T04A11.3.1 | ||||||||
| Other_sequence | Oden_isotig23078 | ||||||||
| Tcir_isotig28121 | |||||||||
| JI164378.1 | |||||||||
| Oden_isotig21689 | |||||||||
| CRC06537_1 | |||||||||
| Tcol_isotig12344 | |||||||||
| CBC05825_1 | |||||||||
| CJC07525_1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041209 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035111 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011177 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018097 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041208 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1155951 | ||||||||
| Drives_construct | WBCnstr00030672 | ||||||||
| Construct_product | WBCnstr00030672 | ||||||||
| Microarray_results | 173066_at | ||||||||
| 188801_s_at | |||||||||
| Expression_cluster (83) | |||||||||
| Interaction | WBInteraction000143558 | ||||||||
| WBInteraction000211825 | |||||||||
| WBInteraction000226545 | |||||||||
| WBInteraction000228366 | |||||||||
| WBInteraction000406616 | |||||||||
| WBInteraction000461330 | |||||||||
| Map_info | Map | IV | Position | 5.97482 | |||||
| Positive | Positive_clone | T04A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
