WormBase Tree Display for Gene: WBGene00011418

WBGene00011418 SMap: S_parent: Sequence: T04A11
  Identity: Version: 2
    Name: CGC_name: igdb-1 Person_evidence: WBPerson260
      Sequence_name: T04A11.3
      Molecular_name: T04A11.3
        T04A11.3.1
        CE42641
      Other_name: CELE_T04A11.3 Accession_evidence: NDB BX284604
      Public_name: igdb-1
    DB_info: Database: AceView gene 4N247
        WormQTL gene WBGene00011418
        WormFlux gene WBGene00011418
        NDB locus_tag CELE_T04A11.3
        Panther gene CAEEL|WormBase=WBGene00011418|UniProtKB=O18016
          family PTHR13817
        NCBI gene 3565301
        RefSeq protein NM_069986.2
        SwissProt UniProtAcc O18016
        TREEFAM TREEFAM_ID TF315410
        UniProt_GCRP UniProtAcc O18016
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 02 Mar 2012 16:42:47 WBPerson2970 Name_change: CGC_name: igdb-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: igdb
    Allele (20)
    Strain: WBStrain00047635
    RNASeq_FPKM (74)
    GO_annotation: 00031256
      00031257
      00031258
    Ortholog: WBGene00026220 Caenorhabditis briggsae From_analysis: OrthoMCL
            WormBase-Compara
      WBGene00148438 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00145498 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00122011 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00074444 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00065724 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00222637 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g8524 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15277 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5340 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g11100 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7797 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g15776 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4618 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13689 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g11684 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g20003 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g25157 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22723 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00423.g10659 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00423.g10660 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_IV.g14246 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12680 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00605.g13459 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_04801 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014309 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02862 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_40244300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g12087 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00240957 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00096000 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00266049 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00266150 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00266421 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00302910 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0036454 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            PhylomeDB
    Paralog (25)
    Structured_description: Automated_description: Predicted to be located in plasma membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T04A11.3
    Corresponding_CDS_history: T04A11.3:wp191
    Corresponding_transcript: T04A11.3.1
    Other_sequence: Oden_isotig23078
      Tcir_isotig28121
      JI164378.1
      Oden_isotig21689
      CRC06537_1
      Tcol_isotig12344
      CBC05825_1
      CJC07525_1
  Experimental_info: RNAi_result: WBRNAi00041209 Inferred_automatically: RNAi_primary
      WBRNAi00035111 Inferred_automatically: RNAi_primary
      WBRNAi00011177 Inferred_automatically: RNAi_primary
      WBRNAi00018097 Inferred_automatically: RNAi_primary
      WBRNAi00041208 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1155951
    Drives_construct: WBCnstr00030672
    Construct_product: WBCnstr00030672
    Microarray_results: 173066_at
      188801_s_at
    Expression_cluster (83)
    Interaction: WBInteraction000143558
      WBInteraction000211825
      WBInteraction000226545
      WBInteraction000228366
      WBInteraction000406616
      WBInteraction000461330
  Map_info: Map: IV Position: 5.97482
    Positive: Positive_clone: T04A11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene