WormBase Tree Display for Gene: WBGene00011394
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WBGene00011394 | SMap | S_parent | Sequence | T03D8 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | sshk-1 | Person_evidence | WBPerson260 | |||
WBPerson59688 | |||||||
Sequence_name | T03D8.7 | ||||||
Molecular_name | T03D8.7 | ||||||
T03D8.7.1 | |||||||
CE18925 | |||||||
Other_name | CELE_T03D8.7 | Accession_evidence | NDB | BX284605 | |||
Public_name | sshk-1 | ||||||
DB_info | Database | AceView | gene | 5V287 | |||
WormQTL | gene | WBGene00011394 | |||||
WormFlux | gene | WBGene00011394 | |||||
NDB | locus_tag | CELE_T03D8.7 | |||||
NCBI | gene | 180363 | |||||
RefSeq | protein | NM_075615.4 | |||||
TrEMBL | UniProtAcc | Q9XTY0 | |||||
UniProt_GCRP | UniProtAcc | Q9XTY0 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | sshk | ||||||
Allele (14) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (12) | |||||||
Structured_description | Automated_description | Enriched in neurons based on tiling array; microarray; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; RNA-seq; and tiling array studies. Is affected by thirteen chemicals including hydrogen sulfide; methylmercuric chloride; and rotenone based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T03D8.7 | |||||
Corresponding_transcript | T03D8.7.1 | ||||||
Experimental_info | RNAi_result | WBRNAi00035087 | Inferred_automatically | RNAi_primary | |||
WBRNAi00052268 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1019429 | ||||||
Expr1155899 | |||||||
Expr2005772 | |||||||
Expr2023987 | |||||||
Microarray_results (17) | |||||||
Expression_cluster (125) | |||||||
Interaction (32) | |||||||
Map_info | Positive | Positive_clone | T03D8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | V | 25.2712 | |||||
Reference | WBPaper00041771 | ||||||
WBPaper00064216 | |||||||
Method | Gene |