WormBase Tree Display for Gene: WBGene00011174
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| WBGene00011174 | SMap | S_parent | Sequence | R09E10 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | acs-23 | Person_evidence | WBPerson237 | ||||||
| WBPerson4025 | ||||||||||
| Sequence_name | R09E10.4 | |||||||||
| Molecular_name | R09E10.4 | |||||||||
| Other_name | CELE_R09E10.4 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | acs-23 | |||||||||
| DB_info | Database | AceView | gene | 4L70 | ||||||
| WormQTL | gene | WBGene00011174 | ||||||||
| WormFlux | gene | WBGene00011174 | ||||||||
| NDB | locus_tag | CELE_R09E10.4 | ||||||||
| NCBI | gene | 187742 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 02 Oct 2015 11:36:38 | WBPerson2970 | Name_change | CGC_name | acs-23 | |||||
| 3 | 02 Oct 2015 13:22:07 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | acs | |||||||||
| Allele (47) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog (16) | ||||||||||
| Paralog | WBGene00011173 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00022037 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00013575 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00019920 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00020343 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Structured_description | Automated_description | Enriched in germ line and in male based on RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray; RNA-seq; and tiling array studies. Is affected by five chemicals including multi-walled carbon nanotube; Doxycycline; and paraquat based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | R09E10.4:wp120 | ||||||||
| R09E10.4a:wp250 | ||||||||||
| Corresponding_transcript_history | R09E10.4b:wp250 | |||||||||
| Corresponding_pseudogene | R09E10.4 | |||||||||
| Associated_feature | WBsf997587 | |||||||||
| WBsf1018067 | ||||||||||
| Experimental_info | Expr_pattern | Expr1012471 | ||||||||
| Expr1155295 | ||||||||||
| Microarray_results (17) | ||||||||||
| Expression_cluster (74) | ||||||||||
| Interaction (15) | ||||||||||
| Map_info | Map | IV | Position | 4.57324 | ||||||
| Positive | Positive_clone | R09E10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00026800 | |||||||||
| WBPaper00042257 | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
