WormBase Tree Display for Gene: WBGene00011139

WBGene00011139 SMap: S_parent: Sequence: R08B4
  Identity: Version: 1
    Name: Sequence_name: R08B4.3
      Molecular_name: R08B4.3
        R08B4.3.1
        CE20025
      Other_name: CELE_R08B4.3 Accession_evidence: NDB BX284606
      Public_name: R08B4.3
    DB_info: Database: AceView gene XL738
        WormQTL gene WBGene00011139
        WormFlux gene WBGene00011139
        NDB locus_tag CELE_R08B4.3
        Panther gene CAEEL|WormBase=WBGene00011139|UniProtKB=Q9XVW5
          family PTHR14255
        NCBI gene 181301
        RefSeq protein NM_077458.6
        TrEMBL UniProtAcc Q9XVW5
        UniProt_GCRP UniProtAcc Q9XVW5
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (34)
    RNASeq_FPKM (74)
    Ortholog (25)
    Paralog: WBGene00010891 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to enable metal ion binding activity. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R08B4.3
    Corresponding_transcript: R08B4.3.1
    Other_sequence: HC09246
      HCC11943_1
    Associated_feature: WBsf654388
      WBsf237935
  Experimental_info: RNAi_result: WBRNAi00051527 Inferred_automatically: RNAi_primary
      WBRNAi00001686 Inferred_automatically: RNAi_primary
      WBRNAi00034738 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013502
      Expr1034898
      Expr1155203
      Expr2005482
      Expr2023703
    Drives_construct: WBCnstr00030901
    Construct_product: WBCnstr00030901
    Microarray_results (18)
    Expression_cluster: WBPaper00030922:glycosylated_protein
      WBPaper00032031:DConiospora_upregulated_OligoArray_24h
      WBPaper00032976:non_compensated_genes
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:hypodermis_larva_enriched
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
      WBPaper00041071:spe-44_downregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Oogenic
      WBPaper00045774:clk-1_downregulated
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00048988:neuron_expressed
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050903:mir-35-41(nDf50)_25C_downregulated
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051558:aging_regulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:alovudine_72h_regulated
      WBPaper00053321:mes-4(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
      WBPaper00053321:PGCs_depleted_NuGen
      WBPaper00053388:dauer_regulated_Cluster5
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00055827:pfd-6(gk493446)_upregulated
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056868:P.aeruginosa_upregulated_smallRNA
      WBPaper00057041:unc-70(cas983)_upregulated
      WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_upregulated
      WBPaper00057140:pptr-1(tm3103)_upregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061340:Neuroblast_ASG_AWA
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061527:C24A3.4_16071-ech-8
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062193:hsf-1(RNAi)_downregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00064005:starvation_upregulated_N2_protein
      WBPaper00064122:vulva_transcriptome
      WBPaper00064315:mes-3(bn199)_upregulated_EGCs
      WBPaper00064315:mes-3(bn199)_upregulated_PGCs
      WBPaper00064315:mes-4(bn73)_upregulated_EGCs
      WBPaper00064315:mes-4(bn73)_upregulated_PGCs
      WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
      WBPaper00064716:paraquat_upregulated
      WBPaper00065373:sek-1(km4)_downregulated_cisplatin
      WBPaper00065975:P-body_vs_oocyte_enriched
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      cgc4386_cluster_3_6
      cgc4489_group_5
      WBPaper00025032:cluster_161
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00034739:N2lessDR1350
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Cadmium_regulated
      WBPaper00038427:lin-54_germline_changed
      WBPaper00040963:Q100_down
      WBPaper00040963:Q200_down
      WBPaper00041002:HF_3d_2.0mM_Up
      WBPaper00041002:HQ_3d_2.0mM_Down
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:cluster_15
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(23_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MDE
      [cgc5767]:expression_class_MD_pd(53_min)
      [cgc5767]:expression_class_ME
    Interaction: WBInteraction000208400
      WBInteraction000220294
      WBInteraction000411294
      WBInteraction000425989
  Map_info: Positive: Positive_clone: R08B4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 2.85956
  Reference: WBPaper00062388
  Method: Gene