WormBase Tree Display for Gene: WBGene00011117
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| WBGene00011117 | SMap | S_parent | Sequence | R07E5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R07E5.11 | |||||||
| Molecular_name | R07E5.11 | ||||||||
| R07E5.11.1 | |||||||||
| CE00669 | |||||||||
| Other_name | CELE_R07E5.11 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | R07E5.11 | ||||||||
| DB_info | Database | AceView | gene | 3F506 | |||||
| WormQTL | gene | WBGene00011117 | |||||||
| WormFlux | gene | WBGene00011117 | |||||||
| NDB | locus_tag | CELE_R07E5.11 | |||||||
| NCBI | gene | 175576 | |||||||
| RefSeq | protein | NM_065494.2 | |||||||
| TrEMBL | UniProtAcc | Q21822 | |||||||
| UniProt_GCRP | UniProtAcc | Q21822 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (11) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3188 | ||||||||
| Ortholog (18) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplpppaaa; excretory cell; germ line; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including Rifampin; allantoin; and silicon dioxide nanoparticle based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07E5.11 | |||||||
| Corresponding_transcript | R07E5.11.1 | ||||||||
| Other_sequence | CJC07576_1 | ||||||||
| Associated_feature | WBsf226520 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00006826 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051480 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00067763 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034713 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051481 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017556 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005824 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025142 | ||||||||
| Expr1034889 | |||||||||
| Expr1155165 | |||||||||
| Expr2005464 | |||||||||
| Expr2023685 | |||||||||
| Drives_construct | WBCnstr00030916 | ||||||||
| Construct_product | WBCnstr00030916 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (106) | |||||||||
| Interaction | WBInteraction000007217 | ||||||||
| WBInteraction000183198 | |||||||||
| WBInteraction000295612 | |||||||||
| WBInteraction000296352 | |||||||||
| WBInteraction000316607 | |||||||||
| WBInteraction000356282 | |||||||||
| WBInteraction000374548 | |||||||||
| WBInteraction000411924 | |||||||||
| WBInteraction000539399 | |||||||||
| Map_info | Positive | Positive_clone | R07E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -3.17483 | |||||||
| Method | Gene |
