WormBase Tree Display for Gene: WBGene00011117
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WBGene00011117 | SMap | S_parent | Sequence | R07E5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | R07E5.11 | |||||||
Molecular_name | R07E5.11 | ||||||||
R07E5.11.1 | |||||||||
CE00669 | |||||||||
Other_name | CELE_R07E5.11 | Accession_evidence | NDB | BX284603 | |||||
Public_name | R07E5.11 | ||||||||
DB_info | Database | AceView | gene | 3F506 | |||||
WormQTL | gene | WBGene00011117 | |||||||
WormFlux | gene | WBGene00011117 | |||||||
NDB | locus_tag | CELE_R07E5.11 | |||||||
NCBI | gene | 175576 | |||||||
RefSeq | protein | NM_065494.2 | |||||||
TrEMBL | UniProtAcc | Q21822 | |||||||
UniProt_GCRP | UniProtAcc | Q21822 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (11) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP3188 | ||||||||
Ortholog (18) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABplpppaaa; excretory cell; germ line; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including Rifampin; allantoin; and silicon dioxide nanoparticle based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00006826 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00051480 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00067763 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034713 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051481 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017556 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005824 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1025142 | ||||||||
Expr1034889 | |||||||||
Expr1155165 | |||||||||
Expr2005464 | |||||||||
Expr2023685 | |||||||||
Drives_construct | WBCnstr00030916 | ||||||||
Construct_product | WBCnstr00030916 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (106) | |||||||||
Interaction | WBInteraction000007217 | ||||||||
WBInteraction000183198 | |||||||||
WBInteraction000295612 | |||||||||
WBInteraction000296352 | |||||||||
WBInteraction000316607 | |||||||||
WBInteraction000356282 | |||||||||
WBInteraction000374548 | |||||||||
WBInteraction000411924 | |||||||||
WBInteraction000539399 | |||||||||
Map_info | Positive | Positive_clone | R07E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | -3.17483 | |||||||
Method | Gene |