WormBase Tree Display for Gene: WBGene00011035

WBGene00011035 SMap: S_parent: Sequence: R05D11
  Identity: Version: 2
    Name: CGC_name: snrp-27 Paper_evidence: WBPaper00033092
          Person_evidence: WBPerson713
      Sequence_name: R05D11.7
      Molecular_name: R05D11.7
        R05D11.7.1
        CE06242
      Other_name: CELE_R05D11.7 Accession_evidence: NDB BX284601
      Public_name: snrp-27
    DB_info: Database: AceView gene 1J179
        WormQTL gene WBGene00011035
        WormFlux gene WBGene00011035
        NDB locus_tag CELE_R05D11.7
        Panther gene CAEEL|WormBase=WBGene00011035|UniProtKB=Q21739
          family PTHR31077
        NCBI gene 172652
        RefSeq protein NM_001383485.2
        TREEFAM TREEFAM_ID TF314458
        TrEMBL UniProtAcc Q21739
        UniProt_GCRP UniProtAcc Q21739
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 Nov 2011 16:29:49 WBPerson2970 Name_change: CGC_name: snrp-27
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: snrp
    Allele (12)
    Strain: WBStrain00055588
    RNASeq_FPKM (74)
    GO_annotation: 00072594
      00072595
      00072596
      00072597
      00072598
      00118335
    Contained_in_operon: CEOP1484
    Ortholog (18)
    Structured_description: Automated_description: Predicted to be involved in RNA splicing and mRNA processing. Predicted to be located in nucleus. Predicted to be part of ribonucleoprotein complex. Is an ortholog of human SNRNP27 (small nuclear ribonucleoprotein U4/U6.U5 subunit 27). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R05D11.7
    Corresponding_transcript: R05D11.7.1
    Other_sequence (22)
    Associated_feature: WBsf656644
      WBsf218174
      WBsf218175
  Experimental_info: RNAi_result: WBRNAi00004047 Inferred_automatically: RNAi_primary
      WBRNAi00034598 Inferred_automatically: RNAi_primary
      WBRNAi00026025 Inferred_automatically: RNAi_primary
      WBRNAi00026024 Inferred_automatically: RNAi_primary
      WBRNAi00116974 Inferred_automatically: RNAi_primary
      WBRNAi00026023 Inferred_automatically: RNAi_primary
      WBRNAi00062046 Inferred_automatically: RNAi_primary
      WBRNAi00051271 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015726
      Expr1034839
      Expr1154973
      Expr2015973
      Expr2034208
    Drives_construct: WBCnstr00030977
    Construct_product: WBCnstr00030977
    Microarray_results (20)
    Expression_cluster (118)
    Interaction: WBInteraction000303523
      WBInteraction000420665
      WBInteraction000576689
  Map_info: Map: I Position: 2.98902
    Positive: Positive_clone: R05D11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00033092
    WBPaper00036306
    WBPaper00038491
    WBPaper00054863
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene