WormBase Tree Display for Gene: WBGene00011003
expand all nodes | collapse all nodes | view schema
| WBGene00011003 | SMap | S_parent | Sequence | R04B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R04B5.5 | |||||||
| Molecular_name | R04B5.5 | ||||||||
| R04B5.5.1 | |||||||||
| CE06215 | |||||||||
| Other_name | CELE_R04B5.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | R04B5.5 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (22) | |||||||||
| Strain | WBStrain00037671 | ||||||||
| WBStrain00037708 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00072473 | ||||||||
| 00072474 | |||||||||
| 00072475 | |||||||||
| 00072476 | |||||||||
| 00118318 | |||||||||
| Ortholog (42) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Concise_description | R04B5.5 encodes one of two C. elegans sorbitol dehydrogense orthologs; by homology the product of R04B5.5 is predicted to catalyze the reversible oxidation of sorbitol to fructose in the presence of NAD+; in the embryo, an R04B5.5::gfp fusion is expressed in body wall muscle, gut, and tail hypodermis. | Paper_evidence | WBPaper00031003 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Nov 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable L-iditol 2-dehydrogenase activity. Predicted to be involved in sorbitol catabolic process. Expressed in body wall musculature and intestine. Human ortholog(s) of this gene implicated in sorbitol dehydrogenase deficiency with peripheral neuropathy. Is an ortholog of human SORD (sorbitol dehydrogenase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081376 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11184) | ||||
| Molecular_info | Corresponding_CDS | R04B5.5 | |||||||
| Corresponding_transcript | R04B5.5.1 | ||||||||
| Other_sequence (43) | |||||||||
| Associated_feature | WBsf232328 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00034577 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017394 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051226 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075888 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4917 | ||||||||
| Expr1016393 | |||||||||
| Expr1034823 | |||||||||
| Expr1154931 | |||||||||
| Expr2005365 | |||||||||
| Expr2023586 | |||||||||
| Drives_construct | WBCnstr00012330 | ||||||||
| WBCnstr00031001 | |||||||||
| Construct_product | WBCnstr00031001 | ||||||||
| Microarray_results | SMD_R04B5.5 | ||||||||
| 190358_at | |||||||||
| A_12_P100208 | |||||||||
| Aff_R04B5.5 | |||||||||
| GPL13394_WBGene00011003 | |||||||||
| GPL13914_R04B5.5 | |||||||||
| GPL14144_R04B5.5_532-591_0.908_7_C | |||||||||
| GPL14144_R04B5.5_594-653_0.939_1_A | |||||||||
| GPL14144_R04B5.5_803-862_0.913_4_B | |||||||||
| GPL19516_CGZ0030798 | |||||||||
| GPL21109_R04B5.5 | |||||||||
| GPL3518_CE06215 | |||||||||
| GPL8304_CE_WBGene00011003_A | |||||||||
| GPL8304_CE_WBGene00011003_B | |||||||||
| GPL8304_CE_WBGene00011003_C | |||||||||
| GPL8673_R04B5_5P00120 | |||||||||
| GPL8673_R04B5_5P00663 | |||||||||
| GPL8673_R04B5_5P00730 | |||||||||
| GPL9450_R04B5.5 | |||||||||
| cea2.p.121971 | |||||||||
| Expression_cluster (170) | |||||||||
| Interaction (41) | |||||||||
| Map_info | Positive | Positive_clone | R04B5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 2.27378 | |||||||
| Reference | WBPaper00031003 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
