WormBase Tree Display for Gene: WBGene00010995
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| WBGene00010995 | SMap | S_parent | Sequence | R03E1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ceh-90 | Person_evidence | WBPerson260 | |||||
| WBPerson83 | |||||||||
| Sequence_name | R03E1.4 | ||||||||
| Molecular_name | R03E1.4a | ||||||||
| R03E1.4a.1 | |||||||||
| CE36660 | |||||||||
| R03E1.4b | |||||||||
| CE51996 | |||||||||
| R03E1.4b.1 | |||||||||
| Other_name | CELE_R03E1.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ceh-90 | ||||||||
| DB_info | Database | AceView | gene | XO772 | |||||
| WormQTL | gene | WBGene00010995 | |||||||
| WormFlux | gene | WBGene00010995 | |||||||
| NDB | locus_tag | CELE_R03E1.4 | |||||||
| NCBI | gene | 3565071 | |||||||
| RefSeq | protein | NM_001351893.1 | |||||||
| NM_001029653.1 | |||||||||
| TrEMBL | UniProtAcc | Q69YW8 | |||||||
| A0A1X7RBN4 | |||||||||
| UniProt_GCRP | UniProtAcc | Q69YW8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 28 May 2010 15:24:57 | WBPerson2970 | Name_change | CGC_name | ceh-90 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ceh | ||||||||
| Allele (46) | |||||||||
| Strain | WBStrain00030110 | ||||||||
| WBStrain00052073 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00002737 | ||||||||
| 00002738 | |||||||||
| 00002739 | |||||||||
| 00002740 | |||||||||
| 00002741 | |||||||||
| 00002742 | |||||||||
| 00118310 | |||||||||
| Ortholog | chrX_pilon.g20530 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | ceh-90 is a divergent homeobox gene and encodes one homeodomain; most homeodomain proteins bind DNA and function as transcription factors; ceh-90 is expressed in the intestine, ventral nerve cord, dorsal nerve cord, head neurons, tail neurons, and the head muscle. | Paper_evidence | WBPaper00046864 | |||||
| WBPaper00029055 | |||||||||
| WBPaper00037950 | |||||||||
| WBPaper00041419 | |||||||||
| Person_evidence | WBPerson83 | ||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 19 Apr 2017 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA binding activity. Predicted to be located in nucleus. Expressed in head muscle; intestine; neurons; and somatic nervous system. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R03E1.4a | |||||||
| R03E1.4b | |||||||||
| Corresponding_transcript | R03E1.4a.1 | ||||||||
| R03E1.4b.1 | |||||||||
| Associated_feature | WBsf978286 | ||||||||
| WBsf979083 | |||||||||
| Transcription_factor | WBTranscriptionFactor000840 | ||||||||
| Experimental_info | Expr_pattern | Expr7627 | |||||||
| Expr15613 | |||||||||
| Expr1025524 | |||||||||
| Expr1154888 | |||||||||
| Expr1200061 | |||||||||
| Expr1200083 | |||||||||
| Expr2009915 | |||||||||
| Expr2028155 | |||||||||
| Drives_construct | WBCnstr00012772 | ||||||||
| WBCnstr00031008 | |||||||||
| Construct_product | WBCnstr00016709 | ||||||||
| WBCnstr00031008 | |||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (43) | |||||||||
| Map_info | Map | X | Position | 16.6043 | Error | 0.022249 | |||
| Positive | Positive_clone | R03E1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00060123 | ||||||||
| WBPaper00061738 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
