WormBase Tree Display for Gene: WBGene00010970
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| WBGene00010970 | SMap | S_parent | Sequence | R01E6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | glb-20 | Paper_evidence | WBPaper00031066 | |||||
| Person_evidence | WBPerson1540 | ||||||||
| Sequence_name | R01E6.6 | ||||||||
| Molecular_name | R01E6.6 | ||||||||
| R01E6.6.1 | |||||||||
| CE43163 | |||||||||
| Other_name | CELE_R01E6.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | glb-20 | ||||||||
| DB_info | Database | AceView | gene | XO168 | |||||
| WormQTL | gene | WBGene00010970 | |||||||
| WormFlux | gene | WBGene00010970 | |||||||
| NDB | locus_tag | CELE_R01E6.6 | |||||||
| NCBI | gene | 187506 | |||||||
| RefSeq | protein | NM_077866.4 | |||||||
| TREEFAM | TREEFAM_ID | TF315972 | |||||||
| TrEMBL | UniProtAcc | Q21618 | |||||||
| UniProt_GCRP | UniProtAcc | Q21618 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Oct 2007 15:16:42 | WBPerson2970 | Name_change | CGC_name | glb-20 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | glb | ||||||||
| Allele (91) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00118271 | ||||||||
| 00118272 | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00007981 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | glb-20 encodes a globin; glb-20 transcription is higher in L3 and dauers than in young adults; glb-20 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00025067 | |||||
| WBPaper00031066 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Dec 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable heme binding activity and oxygen binding activity. Expressed in body wall musculature; enteric muscle; head neurons; and somatic nervous system. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R01E6.6 | |||||||
| Corresponding_CDS_history | R01E6.6:wp196 | ||||||||
| Corresponding_transcript | R01E6.6.1 | ||||||||
| Other_sequence | GR14217 | ||||||||
| GRC00348_1 | |||||||||
| JI176608.1 | |||||||||
| Oden_isotig19581 | |||||||||
| Acan_isotig11094 | |||||||||
| Dviv_isotig33358 | |||||||||
| GP02314 | |||||||||
| GPC03434_1 | |||||||||
| Associated_feature | WBsf671207 | ||||||||
| WBsf1007642 | |||||||||
| WBsf1007643 | |||||||||
| WBsf1007644 | |||||||||
| WBsf1007645 | |||||||||
| WBsf1007646 | |||||||||
| WBsf1024251 | |||||||||
| WBsf1024252 | |||||||||
| WBsf1024253 | |||||||||
| WBsf1024254 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051099 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017297 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4890 | ||||||||
| Expr8500 | |||||||||
| Expr1028283 | |||||||||
| Expr1154806 | |||||||||
| Expr2012056 | |||||||||
| Expr2030292 | |||||||||
| Drives_construct | WBCnstr00013329 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (116) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | X | Position | 13.232 | Error | 0.251455 | |||
| Positive | Positive_clone | R01E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031066 | ||||||||
| WBPaper00032254 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
