WormBase Tree Display for Gene: WBGene00010970

WBGene00010970 SMap: S_parent: Sequence: R01E6
  Identity: Version: 2
    Name: CGC_name: glb-20 Paper_evidence: WBPaper00031066
          Person_evidence: WBPerson1540
      Sequence_name: R01E6.6
      Molecular_name: R01E6.6
        R01E6.6.1
        CE43163
      Other_name: CELE_R01E6.6 Accession_evidence: NDB BX284606
      Public_name: glb-20
    DB_info: Database: AceView gene XO168
        WormQTL gene WBGene00010970
        WormFlux gene WBGene00010970
        NDB locus_tag CELE_R01E6.6
        NCBI gene 187506
        RefSeq protein NM_077866.4
        TREEFAM TREEFAM_ID TF315972
        TrEMBL UniProtAcc Q21618
        UniProt_GCRP UniProtAcc Q21618
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 Oct 2007 15:16:42 WBPerson2970 Name_change: CGC_name: glb-20
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: glb
    Allele (91)
    RNASeq_FPKM (74)
    GO_annotation: 00118271
      00118272
    Ortholog: WBGene00029478 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00065272 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00154660 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00136970 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00107242 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00225428 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2706 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g236 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7885 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18224 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g5230 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g19210 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14067 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g10848 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g182 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3937 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00160.g5915 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-glb-20 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g22065 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00457.g11637 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01600 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025731 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04045 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_X0125400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g20437 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239249 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00263830 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00007981 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
    Structured_description: Concise_description: glb-20 encodes a globin; glb-20 transcription is higher in L3 and dauers than in young adults; glb-20 has no obvious function in mass RNAi assays. Paper_evidence: WBPaper00025067
            WBPaper00031066
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Dec 2007 00:00:00
      Automated_description: Predicted to enable heme binding activity and oxygen binding activity. Expressed in body wall musculature; enteric muscle; head neurons; and somatic nervous system. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R01E6.6
    Corresponding_CDS_history: R01E6.6:wp196
    Corresponding_transcript: R01E6.6.1
    Other_sequence: GR14217
      GRC00348_1
      JI176608.1
      Oden_isotig19581
      Acan_isotig11094
      Dviv_isotig33358
      GP02314
      GPC03434_1
    Associated_feature: WBsf671207
      WBsf1007642
      WBsf1007643
      WBsf1007644
      WBsf1007645
      WBsf1007646
      WBsf1024251
      WBsf1024252
      WBsf1024253
      WBsf1024254
  Experimental_info: RNAi_result: WBRNAi00051099 Inferred_automatically: RNAi_primary
      WBRNAi00017297 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr4890
      Expr8500
      Expr1028283
      Expr1154806
      Expr2012056
      Expr2030292
    Drives_construct: WBCnstr00013329
    Microarray_results (18)
    Expression_cluster (116)
    Interaction (12)
  Map_info: Map: X Position: 13.232 Error: 0.251455
    Positive: Positive_clone: R01E6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031066
    WBPaper00032254
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene